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Chlorine in PDB 6rn5: Ppta From Streptomyces Chartreusis

Protein crystallography data

The structure of Ppta From Streptomyces Chartreusis, PDB code: 6rn5 was solved by S.Werten, N.Rustmeier, W.Hinrichs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.20 / 2.04
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 49.303, 132.233, 116.398, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 23.7

Other elements in 6rn5:

The structure of Ppta From Streptomyces Chartreusis also contains other interesting chemical elements:

Copper (Cu) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Ppta From Streptomyces Chartreusis (pdb code 6rn5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Ppta From Streptomyces Chartreusis, PDB code: 6rn5:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6rn5

Go back to Chlorine Binding Sites List in 6rn5
Chlorine binding site 1 out of 2 in the Ppta From Streptomyces Chartreusis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ppta From Streptomyces Chartreusis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:33.8
occ:1.00
CU A:CU401 2.1 31.4 1.0
O A:HOH529 3.3 28.3 1.0
NE2 A:HIS269 3.3 35.1 1.0
CD2 A:HIS269 3.3 36.5 1.0
NE2 A:HIS346 3.3 29.4 1.0
NE2 A:HIS260 3.4 38.1 1.0
CA A:ALA323 3.7 28.6 1.0
CD2 A:HIS346 3.7 28.4 1.0
CE1 A:HIS260 3.7 37.8 1.0
CB A:ALA323 4.0 27.4 1.0
N A:ALA323 4.0 28.8 1.0
C A:ALA322 4.2 29.5 1.0
O A:ALA322 4.3 29.6 1.0
CB A:ALA326 4.3 26.8 1.0
CE1 A:HIS346 4.6 33.6 1.0
CE1 A:HIS269 4.6 40.1 1.0
CG A:PRO268 4.6 58.6 1.0
CG A:HIS269 4.7 35.0 1.0
CD2 A:HIS260 4.7 38.4 1.0
CB A:ALA322 4.8 27.4 1.0
CB A:PRO268 4.9 53.5 1.0
CD2 A:LEU262 4.9 74.8 1.0
C A:ALA323 4.9 29.9 1.0

Chlorine binding site 2 out of 2 in 6rn5

Go back to Chlorine Binding Sites List in 6rn5
Chlorine binding site 2 out of 2 in the Ppta From Streptomyces Chartreusis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Ppta From Streptomyces Chartreusis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:73.5
occ:1.00
NH1 A:ARG200 3.6 50.1 1.0
NH2 A:ARG200 3.8 44.8 1.0
CD1 A:TRP92 4.0 49.4 1.0
CZ A:ARG200 4.2 46.7 1.0
CG A:TRP92 4.6 48.0 1.0
CB A:TRP92 4.7 41.5 1.0
NE1 A:TRP92 4.8 49.7 1.0

Reference:

S.Werten, N.H.Rustmeier, M.Gemmer, M.J.Virolle, W.Hinrichs. Structural and Biochemical Analysis of A Phosin From Streptomyces Chartreusis Reveals A Combined Polyphosphate- and Metal-Binding Fold. Febs Lett. V. 593 2019 2019.
ISSN: ISSN 0014-5793
PubMed: 31183865
DOI: 10.1002/1873-3468.13476
Page generated: Mon Jul 29 14:35:24 2024

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