Chlorine in PDB 6rt3: Native Tetragonal Lysozyme - Synchrotron Data
Enzymatic activity of Native Tetragonal Lysozyme - Synchrotron Data
All present enzymatic activity of Native Tetragonal Lysozyme - Synchrotron Data:
3.2.1.17;
Protein crystallography data
The structure of Native Tetragonal Lysozyme - Synchrotron Data, PDB code: 6rt3
was solved by
P.J.B.Pereira,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
22.22 /
1.05
|
|
Space group
|
P 43 21 2
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
78.863,
78.863,
36.800,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
12.6 /
14.7
|
Other elements in 6rt3:
The structure of Native Tetragonal Lysozyme - Synchrotron Data also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Native Tetragonal Lysozyme - Synchrotron Data
(pdb code 6rt3). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the
Native Tetragonal Lysozyme - Synchrotron Data, PDB code: 6rt3:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Chlorine binding site 1 out
of 8 in 6rt3
Go back to
Chlorine Binding Sites List in 6rt3
Chlorine binding site 1 out
of 8 in the Native Tetragonal Lysozyme - Synchrotron Data
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Native Tetragonal Lysozyme - Synchrotron Data within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl208
b:11.6
occ:1.00
|
HD22
|
A:ASN113
|
2.5
|
12.2
|
1.0
|
|
HA
|
A:ALA110
|
2.8
|
12.1
|
1.0
|
|
HB2
|
A:ASN113
|
2.9
|
11.2
|
1.0
|
|
ND2
|
A:ASN113
|
3.3
|
10.1
|
1.0
|
|
HG12
|
A:VAL109
|
3.4
|
19.3
|
1.0
|
|
CB
|
A:ASN113
|
3.6
|
9.3
|
1.0
|
|
HD2
|
A:ARG114
|
3.6
|
13.4
|
1.0
|
|
HB3
|
A:ASN113
|
3.6
|
11.2
|
1.0
|
|
CA
|
A:ALA110
|
3.7
|
10.1
|
1.0
|
|
HB2
|
A:ALA110
|
3.7
|
14.2
|
1.0
|
|
HG3
|
A:ARG114
|
3.8
|
13.7
|
1.0
|
|
HD21
|
A:ASN113
|
3.9
|
12.2
|
1.0
|
|
CG
|
A:ASN113
|
4.0
|
9.8
|
1.0
|
|
CB
|
A:ALA110
|
4.1
|
11.8
|
1.0
|
|
N
|
A:ALA110
|
4.2
|
9.6
|
1.0
|
|
HB1
|
A:ALA110
|
4.2
|
14.2
|
1.0
|
|
O
|
A:VAL109
|
4.3
|
11.1
|
1.0
|
|
CG1
|
A:VAL109
|
4.4
|
16.1
|
1.0
|
|
CD
|
A:ARG114
|
4.4
|
11.2
|
1.0
|
|
C
|
A:VAL109
|
4.4
|
11.2
|
1.0
|
|
HD3
|
A:ARG114
|
4.5
|
13.4
|
1.0
|
|
CG
|
A:ARG114
|
4.6
|
11.4
|
1.0
|
|
H
|
A:ALA110
|
4.6
|
11.5
|
1.0
|
|
HG11
|
A:VAL109
|
4.7
|
19.3
|
1.0
|
|
HG13
|
A:VAL109
|
4.7
|
19.3
|
1.0
|
|
H
|
A:ASN113
|
4.8
|
11.2
|
1.0
|
|
C
|
A:ALA110
|
4.8
|
8.9
|
1.0
|
|
HH11
|
A:ARG114
|
4.9
|
12.8
|
1.0
|
|
HG2
|
A:ARG114
|
4.9
|
13.7
|
1.0
|
|
O
|
A:ALA110
|
4.9
|
9.6
|
1.0
|
|
CA
|
A:ASN113
|
5.0
|
9.4
|
1.0
|
|
Chlorine binding site 2 out
of 8 in 6rt3
Go back to
Chlorine Binding Sites List in 6rt3
Chlorine binding site 2 out
of 8 in the Native Tetragonal Lysozyme - Synchrotron Data
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Native Tetragonal Lysozyme - Synchrotron Data within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl209
b:15.0
occ:1.00
|
HG
|
A:SER24
|
2.2
|
16.8
|
1.0
|
|
H
|
A:GLY26
|
2.4
|
10.9
|
1.0
|
|
HA
|
A:GLN121
|
2.8
|
17.1
|
1.0
|
|
HA3
|
A:GLY26
|
2.9
|
11.2
|
1.0
|
|
HB2
|
A:SER24
|
2.9
|
15.3
|
1.0
|
|
O
|
A:HOH436
|
3.0
|
33.5
|
1.0
|
|
OG
|
A:SER24
|
3.0
|
14.0
|
1.0
|
|
N
|
A:GLY26
|
3.1
|
9.1
|
1.0
|
|
HD11
|
A:ILE124
|
3.3
|
25.0
|
1.0
|
|
HG23
|
A:VAL120
|
3.4
|
15.6
|
1.0
|
|
CB
|
A:SER24
|
3.5
|
12.8
|
1.0
|
|
HD13
|
A:ILE124
|
3.5
|
25.0
|
1.0
|
|
CA
|
A:GLY26
|
3.5
|
9.3
|
1.0
|
|
HG12
|
A:ILE124
|
3.5
|
19.0
|
1.0
|
|
HG2
|
A:GLN121
|
3.6
|
29.5
|
1.0
|
|
HB2
|
A:GLN121
|
3.6
|
22.5
|
1.0
|
|
CA
|
A:GLN121
|
3.6
|
14.2
|
1.0
|
|
CD1
|
A:ILE124
|
3.8
|
20.8
|
1.0
|
|
N
|
A:GLN121
|
4.0
|
12.8
|
1.0
|
|
CB
|
A:GLN121
|
4.0
|
18.7
|
1.0
|
|
HB3
|
A:SER24
|
4.1
|
15.3
|
1.0
|
|
H
|
A:LEU25
|
4.1
|
12.3
|
1.0
|
|
HA2
|
A:GLY26
|
4.2
|
11.2
|
1.0
|
|
CG1
|
A:ILE124
|
4.2
|
15.8
|
1.0
|
|
N
|
A:LEU25
|
4.2
|
10.3
|
1.0
|
|
H
|
A:ASN27
|
4.2
|
10.0
|
1.0
|
|
CG
|
A:GLN121
|
4.2
|
24.6
|
1.0
|
|
H
|
A:GLN121
|
4.3
|
15.4
|
1.0
|
|
O
|
A:VAL120
|
4.3
|
11.8
|
1.0
|
|
C
|
A:VAL120
|
4.3
|
11.6
|
1.0
|
|
CG2
|
A:VAL120
|
4.3
|
13.0
|
1.0
|
|
HB3
|
A:LEU25
|
4.3
|
12.8
|
1.0
|
|
C
|
A:SER24
|
4.3
|
10.3
|
1.0
|
|
C
|
A:LEU25
|
4.3
|
9.4
|
1.0
|
|
HG3
|
A:GLN121
|
4.4
|
29.5
|
1.0
|
|
HG21
|
A:VAL120
|
4.5
|
15.6
|
1.0
|
|
CA
|
A:SER24
|
4.6
|
11.1
|
1.0
|
|
C
|
A:GLY26
|
4.6
|
8.3
|
1.0
|
|
HD12
|
A:ILE124
|
4.7
|
25.0
|
1.0
|
|
HG13
|
A:ILE124
|
4.7
|
19.0
|
1.0
|
|
N
|
A:ASN27
|
4.7
|
8.3
|
1.0
|
|
CA
|
A:LEU25
|
4.7
|
10.5
|
1.0
|
|
O
|
A:SER24
|
4.8
|
10.5
|
1.0
|
|
HG23
|
A:ILE124
|
4.8
|
17.3
|
1.0
|
|
HB
|
A:VAL120
|
4.8
|
14.3
|
1.0
|
|
HG22
|
A:VAL120
|
4.9
|
15.6
|
1.0
|
|
C
|
A:GLN121
|
4.9
|
12.2
|
1.0
|
|
O
|
A:HOH426
|
4.9
|
27.7
|
1.0
|
|
HB3
|
A:GLN121
|
4.9
|
22.5
|
1.0
|
|
HG21
|
A:ILE124
|
5.0
|
17.3
|
1.0
|
|
Chlorine binding site 3 out
of 8 in 6rt3
Go back to
Chlorine Binding Sites List in 6rt3
Chlorine binding site 3 out
of 8 in the Native Tetragonal Lysozyme - Synchrotron Data
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Native Tetragonal Lysozyme - Synchrotron Data within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl210
b:13.4
occ:1.00
|
H
|
A:THR69
|
2.4
|
12.7
|
0.6
|
|
H
|
A:THR69
|
2.4
|
12.7
|
0.4
|
|
O
|
A:HOH421
|
3.1
|
25.3
|
1.0
|
|
O
|
A:HOH369
|
3.1
|
11.0
|
1.0
|
|
HA2
|
A:GLY67
|
3.2
|
14.3
|
1.0
|
|
H
|
A:GLY67
|
3.2
|
12.6
|
1.0
|
|
N
|
A:THR69
|
3.3
|
10.6
|
1.0
|
|
O
|
A:THR69
|
3.4
|
12.3
|
1.0
|
|
H
|
A:ARG68
|
3.4
|
13.0
|
0.4
|
|
H
|
A:ARG68
|
3.4
|
13.0
|
0.6
|
|
N
|
A:ARG68
|
3.5
|
10.8
|
0.4
|
|
N
|
A:ARG68
|
3.5
|
10.8
|
0.6
|
|
C
|
A:GLY67
|
3.5
|
11.3
|
1.0
|
|
O
|
A:HOH376
|
3.6
|
27.9
|
1.0
|
|
CA
|
A:GLY67
|
3.6
|
11.9
|
1.0
|
|
OG
|
A:SER72
|
3.6
|
13.7
|
1.0
|
|
HB
|
A:THR69
|
3.6
|
12.8
|
1.0
|
|
N
|
A:GLY67
|
3.6
|
10.5
|
1.0
|
|
C
|
A:THR69
|
3.7
|
10.7
|
1.0
|
|
OD1
|
A:ASN65
|
3.7
|
13.1
|
1.0
|
|
CA
|
A:THR69
|
3.9
|
10.7
|
1.0
|
|
O
|
A:HOH395
|
4.0
|
13.2
|
1.0
|
|
O
|
A:GLY67
|
4.2
|
13.6
|
1.0
|
|
C
|
A:ARG68
|
4.2
|
11.8
|
0.4
|
|
OD1
|
A:ASP66
|
4.2
|
9.5
|
1.0
|
|
H
|
A:ASP66
|
4.2
|
11.0
|
1.0
|
|
CB
|
A:THR69
|
4.2
|
10.6
|
1.0
|
|
C
|
A:ARG68
|
4.3
|
11.4
|
0.6
|
|
CA
|
A:ARG68
|
4.3
|
12.5
|
0.4
|
|
CA
|
A:ARG68
|
4.4
|
10.7
|
0.6
|
|
HA
|
A:ARG68
|
4.4
|
15.0
|
0.4
|
|
HG1
|
A:THR69
|
4.4
|
12.7
|
1.0
|
|
HA
|
A:ARG68
|
4.5
|
12.8
|
0.6
|
|
HA
|
A:PRO70
|
4.5
|
13.5
|
1.0
|
|
HA3
|
A:GLY67
|
4.5
|
14.3
|
1.0
|
|
N
|
A:PRO70
|
4.6
|
10.9
|
1.0
|
|
H
|
A:SER72
|
4.6
|
18.8
|
1.0
|
|
NA
|
A:NA216
|
4.7
|
11.6
|
1.0
|
|
C
|
A:ASP66
|
4.7
|
9.5
|
1.0
|
|
HA
|
A:THR69
|
4.8
|
12.9
|
1.0
|
|
O
|
A:HOH359
|
4.8
|
18.6
|
0.5
|
|
HB3
|
A:SER72
|
4.9
|
17.4
|
1.0
|
|
CB
|
A:SER72
|
4.9
|
14.5
|
1.0
|
|
OG1
|
A:THR69
|
4.9
|
10.5
|
1.0
|
|
N
|
A:ASP66
|
4.9
|
9.1
|
1.0
|
|
HA
|
A:ASN65
|
4.9
|
12.2
|
1.0
|
|
CG
|
A:ASN65
|
4.9
|
12.8
|
1.0
|
|
O
|
A:HOH445
|
5.0
|
32.6
|
1.0
|
|
Chlorine binding site 4 out
of 8 in 6rt3
Go back to
Chlorine Binding Sites List in 6rt3
Chlorine binding site 4 out
of 8 in the Native Tetragonal Lysozyme - Synchrotron Data
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Native Tetragonal Lysozyme - Synchrotron Data within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl211
b:21.2
occ:1.00
|
HZ3
|
A:LYS33
|
2.6
|
22.0
|
1.0
|
|
HE2
|
A:PHE38
|
2.9
|
13.2
|
1.0
|
|
HZ3
|
A:TRP123
|
3.0
|
17.9
|
1.0
|
|
HD3
|
A:ARG5
|
3.2
|
17.2
|
1.0
|
|
HB2
|
A:ARG5
|
3.4
|
15.7
|
1.0
|
|
NZ
|
A:LYS33
|
3.4
|
18.3
|
1.0
|
|
HD3
|
A:LYS33
|
3.4
|
15.8
|
1.0
|
|
O
|
A:HOH362
|
3.5
|
39.2
|
1.0
|
|
O1
|
A:EDO206
|
3.6
|
29.1
|
1.0
|
|
CE2
|
A:PHE38
|
3.7
|
11.0
|
1.0
|
|
HZ1
|
A:LYS33
|
3.7
|
22.0
|
1.0
|
|
HE2
|
A:LYS33
|
3.7
|
20.1
|
1.0
|
|
CZ3
|
A:TRP123
|
4.0
|
14.9
|
1.0
|
|
CE
|
A:LYS33
|
4.0
|
16.7
|
1.0
|
|
HZ2
|
A:LYS33
|
4.0
|
22.0
|
1.0
|
|
HZ
|
A:PHE38
|
4.1
|
12.0
|
1.0
|
|
CD
|
A:ARG5
|
4.1
|
14.3
|
1.0
|
|
CD
|
A:LYS33
|
4.2
|
13.2
|
1.0
|
|
O
|
A:HOH373
|
4.2
|
29.5
|
1.0
|
|
CB
|
A:ARG5
|
4.3
|
13.1
|
1.0
|
|
CZ
|
A:PHE38
|
4.3
|
10.0
|
1.0
|
|
HE
|
A:ARG5
|
4.4
|
19.7
|
1.0
|
|
HE3
|
A:TRP123
|
4.5
|
14.9
|
1.0
|
|
HG3
|
A:ARG5
|
4.6
|
15.6
|
1.0
|
|
CG
|
A:ARG5
|
4.6
|
13.0
|
1.0
|
|
HD2
|
A:PHE38
|
4.7
|
12.1
|
1.0
|
|
CD2
|
A:PHE38
|
4.7
|
10.1
|
1.0
|
|
HB3
|
A:ARG5
|
4.7
|
15.7
|
1.0
|
|
CE3
|
A:TRP123
|
4.7
|
12.4
|
1.0
|
|
HD2
|
A:LYS33
|
4.7
|
15.8
|
1.0
|
|
NE
|
A:ARG5
|
4.7
|
16.4
|
1.0
|
|
C2
|
A:EDO203
|
4.8
|
29.5
|
1.0
|
|
HH2
|
A:TRP123
|
4.8
|
19.8
|
1.0
|
|
HD2
|
A:ARG5
|
4.8
|
17.2
|
1.0
|
|
CH2
|
A:TRP123
|
4.9
|
16.5
|
1.0
|
|
HE3
|
A:LYS33
|
4.9
|
20.1
|
1.0
|
|
C1
|
A:EDO206
|
4.9
|
26.8
|
1.0
|
|
Chlorine binding site 5 out
of 8 in 6rt3
Go back to
Chlorine Binding Sites List in 6rt3
Chlorine binding site 5 out
of 8 in the Native Tetragonal Lysozyme - Synchrotron Data
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Native Tetragonal Lysozyme - Synchrotron Data within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl212
b:23.3
occ:1.00
|
H
|
A:ILE88
|
2.5
|
13.1
|
1.0
|
|
HG12
|
A:ILE88
|
2.7
|
14.3
|
1.0
|
|
HA
|
A:ASP87
|
3.0
|
15.4
|
1.0
|
|
HE1
|
A:HIS15
|
3.2
|
25.6
|
1.0
|
|
O
|
A:HOH429
|
3.3
|
21.4
|
1.0
|
|
N
|
A:ILE88
|
3.4
|
10.9
|
1.0
|
|
HZ
|
A:PHE3
|
3.4
|
14.2
|
1.0
|
|
HB1
|
A:ALA11
|
3.4
|
14.2
|
1.0
|
|
HG23
|
A:ILE88
|
3.5
|
14.8
|
1.0
|
|
O
|
A:HOH333
|
3.5
|
26.8
|
1.0
|
|
CG1
|
A:ILE88
|
3.7
|
11.9
|
1.0
|
|
CA
|
A:ASP87
|
3.9
|
12.8
|
1.0
|
|
CE1
|
A:HIS15
|
3.9
|
21.4
|
1.0
|
|
O
|
A:SER86
|
4.0
|
15.0
|
1.0
|
|
HG13
|
A:ILE88
|
4.0
|
14.3
|
1.0
|
|
C
|
A:ASP87
|
4.1
|
11.3
|
1.0
|
|
OD1
|
A:ASP87
|
4.1
|
16.5
|
1.0
|
|
HB2
|
A:ALA11
|
4.2
|
14.2
|
1.0
|
|
O
|
A:HOH348
|
4.2
|
40.4
|
1.0
|
|
CB
|
A:ALA11
|
4.2
|
11.9
|
1.0
|
|
CZ
|
A:PHE3
|
4.2
|
11.8
|
1.0
|
|
CB
|
A:ILE88
|
4.3
|
11.0
|
1.0
|
|
CG2
|
A:ILE88
|
4.3
|
12.3
|
1.0
|
|
HH21
|
A:ARG14
|
4.3
|
36.5
|
0.6
|
|
HE2
|
A:PHE3
|
4.3
|
13.9
|
1.0
|
|
CA
|
A:ILE88
|
4.3
|
10.2
|
1.0
|
|
HD13
|
A:ILE88
|
4.5
|
15.7
|
1.0
|
|
CD1
|
A:ILE88
|
4.6
|
13.1
|
1.0
|
|
CG
|
A:ASP87
|
4.6
|
18.7
|
1.0
|
|
HD11
|
A:ILE88
|
4.6
|
15.7
|
1.0
|
|
H
|
A:THR89
|
4.7
|
13.2
|
1.0
|
|
HG21
|
A:ILE88
|
4.7
|
14.8
|
1.0
|
|
HB3
|
A:ALA11
|
4.7
|
14.2
|
1.0
|
|
ND1
|
A:HIS15
|
4.7
|
18.8
|
1.0
|
|
CE2
|
A:PHE3
|
4.7
|
11.6
|
1.0
|
|
HD1
|
A:HIS15
|
4.7
|
22.6
|
1.0
|
|
NE2
|
A:HIS15
|
4.7
|
23.9
|
1.0
|
|
CB
|
A:ASP87
|
4.8
|
15.6
|
1.0
|
|
N
|
A:ASP87
|
4.9
|
12.0
|
1.0
|
|
C
|
A:SER86
|
4.9
|
12.6
|
1.0
|
|
HG1
|
A:THR89
|
4.9
|
17.6
|
1.0
|
|
HZ3
|
A:LYS1
|
5.0
|
20.8
|
0.6
|
|
HG22
|
A:ILE88
|
5.0
|
14.8
|
1.0
|
|
Chlorine binding site 6 out
of 8 in 6rt3
Go back to
Chlorine Binding Sites List in 6rt3
Chlorine binding site 6 out
of 8 in the Native Tetragonal Lysozyme - Synchrotron Data
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Native Tetragonal Lysozyme - Synchrotron Data within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl213
b:28.0
occ:1.00
|
H
|
A:ASN74
|
2.3
|
16.1
|
1.0
|
|
HE
|
A:ARG73
|
2.3
|
23.9
|
1.0
|
|
HB3
|
A:ARG73
|
3.1
|
19.4
|
1.0
|
|
N
|
A:ASN74
|
3.2
|
13.4
|
1.0
|
|
NE
|
A:ARG73
|
3.2
|
19.9
|
1.0
|
|
O
|
A:HOH310
|
3.3
|
37.1
|
1.0
|
|
HA
|
A:ARG73
|
3.4
|
18.1
|
1.0
|
|
HD23
|
A:LEU75
|
3.5
|
22.8
|
1.0
|
|
HD2
|
A:ARG73
|
3.6
|
24.0
|
1.0
|
|
HH21
|
A:ARG73
|
3.6
|
24.6
|
1.0
|
|
HB3
|
A:ASN74
|
3.6
|
17.3
|
1.0
|
|
C
|
A:ASN74
|
3.8
|
14.1
|
1.0
|
|
CB
|
A:ARG73
|
3.8
|
16.2
|
1.0
|
|
O
|
A:ASN74
|
3.9
|
14.6
|
1.0
|
|
CD
|
A:ARG73
|
3.9
|
20.0
|
1.0
|
|
CA
|
A:ARG73
|
3.9
|
15.1
|
1.0
|
|
CA
|
A:ASN74
|
3.9
|
13.5
|
1.0
|
|
C
|
A:ARG73
|
4.0
|
13.6
|
1.0
|
|
CZ
|
A:ARG73
|
4.1
|
18.6
|
1.0
|
|
NH2
|
A:ARG73
|
4.2
|
20.5
|
1.0
|
|
HA
|
A:LEU75
|
4.2
|
17.5
|
1.0
|
|
CB
|
A:ASN74
|
4.3
|
14.4
|
1.0
|
|
CD2
|
A:LEU75
|
4.3
|
19.0
|
1.0
|
|
HD21
|
A:LEU75
|
4.3
|
22.8
|
1.0
|
|
N
|
A:LEU75
|
4.4
|
13.7
|
1.0
|
|
CG
|
A:ARG73
|
4.5
|
18.2
|
1.0
|
|
HG
|
A:LEU75
|
4.5
|
20.1
|
1.0
|
|
HB2
|
A:ARG73
|
4.6
|
19.4
|
1.0
|
|
HD3
|
A:ARG73
|
4.7
|
24.0
|
1.0
|
|
HB2
|
A:ASN74
|
4.7
|
17.3
|
1.0
|
|
H
|
A:LEU75
|
4.8
|
16.4
|
1.0
|
|
O
|
A:HOH411
|
4.8
|
35.7
|
1.0
|
|
CA
|
A:LEU75
|
4.8
|
14.6
|
1.0
|
|
HA
|
A:ASN74
|
4.8
|
16.2
|
1.0
|
|
HG3
|
A:ARG73
|
4.9
|
21.8
|
1.0
|
|
CG
|
A:LEU75
|
5.0
|
16.8
|
1.0
|
|
HD21
|
A:ASN77
|
5.0
|
26.4
|
0.6
|
|
HH22
|
A:ARG73
|
5.0
|
24.6
|
1.0
|
|
Chlorine binding site 7 out
of 8 in 6rt3
Go back to
Chlorine Binding Sites List in 6rt3
Chlorine binding site 7 out
of 8 in the Native Tetragonal Lysozyme - Synchrotron Data
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Native Tetragonal Lysozyme - Synchrotron Data within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl214
b:20.4
occ:1.00
|
HD22
|
A:ASN65
|
2.4
|
17.2
|
1.0
|
|
HB3
|
A:PRO79
|
2.9
|
13.6
|
1.0
|
|
HB3
|
A:ASN65
|
3.0
|
14.1
|
1.0
|
|
O
|
A:HOH424
|
3.0
|
20.1
|
1.0
|
|
O
|
A:HOH476
|
3.2
|
32.5
|
0.6
|
|
HA
|
A:PRO79
|
3.2
|
12.9
|
1.0
|
|
ND2
|
A:ASN65
|
3.2
|
14.3
|
1.0
|
|
CB
|
A:PRO79
|
3.7
|
11.3
|
1.0
|
|
CA
|
A:PRO79
|
3.7
|
10.7
|
1.0
|
|
HD21
|
A:ASN65
|
3.7
|
17.2
|
1.0
|
|
CB
|
A:ASN65
|
3.9
|
11.8
|
1.0
|
|
HD3
|
A:PRO79
|
3.9
|
15.9
|
1.0
|
|
N
|
A:PRO79
|
3.9
|
11.6
|
1.0
|
|
CG
|
A:ASN65
|
4.0
|
12.8
|
1.0
|
|
CD
|
A:PRO79
|
4.3
|
13.2
|
1.0
|
|
O
|
A:ASN65
|
4.3
|
9.5
|
1.0
|
|
HB2
|
A:ASN65
|
4.3
|
14.1
|
1.0
|
|
HB2
|
A:PRO79
|
4.4
|
13.6
|
1.0
|
|
CG
|
A:PRO79
|
4.4
|
14.8
|
1.0
|
|
HD21
|
A:ASN74
|
4.5
|
17.7
|
1.0
|
|
HG3
|
A:PRO79
|
4.5
|
17.8
|
1.0
|
|
C
|
A:ILE78
|
4.5
|
12.2
|
1.0
|
|
O
|
A:ILE78
|
4.7
|
11.6
|
1.0
|
|
HD22
|
A:ASN74
|
4.8
|
17.7
|
1.0
|
|
H
|
A:ASN65
|
4.9
|
11.7
|
1.0
|
|
ND2
|
A:ASN74
|
4.9
|
14.7
|
1.0
|
|
C
|
A:ASN65
|
4.9
|
9.3
|
1.0
|
|
CA
|
A:ASN65
|
4.9
|
10.2
|
1.0
|
|
Chlorine binding site 8 out
of 8 in 6rt3
Go back to
Chlorine Binding Sites List in 6rt3
Chlorine binding site 8 out
of 8 in the Native Tetragonal Lysozyme - Synchrotron Data
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Native Tetragonal Lysozyme - Synchrotron Data within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl215
b:20.0
occ:1.00
|
O
|
A:HOH473
|
2.7
|
28.1
|
1.0
|
|
HG23
|
A:VAL2
|
2.8
|
13.7
|
1.0
|
|
O
|
A:HOH351
|
3.0
|
10.4
|
1.0
|
|
O
|
A:HOH407
|
3.4
|
23.7
|
1.0
|
|
O
|
A:HOH417
|
3.5
|
33.1
|
1.0
|
|
H
|
A:VAL2
|
3.6
|
12.9
|
0.4
|
|
H
|
A:VAL2
|
3.7
|
12.9
|
0.6
|
|
CG2
|
A:VAL2
|
3.7
|
11.4
|
1.0
|
|
HG21
|
A:VAL2
|
3.8
|
13.7
|
1.0
|
|
HA
|
A:LYS1
|
3.9
|
13.1
|
0.6
|
|
HA
|
A:LYS1
|
3.9
|
14.1
|
0.4
|
|
H2
|
A:LYS1
|
4.0
|
14.7
|
0.4
|
|
H2
|
A:LYS1
|
4.0
|
13.0
|
0.6
|
|
N
|
A:VAL2
|
4.1
|
10.7
|
1.0
|
|
O
|
A:HOH303
|
4.1
|
33.1
|
1.0
|
|
HE21
|
A:GLN41
|
4.2
|
11.7
|
1.0
|
|
HB
|
A:VAL2
|
4.3
|
14.1
|
1.0
|
|
HG22
|
A:VAL2
|
4.3
|
13.7
|
1.0
|
|
CA
|
A:LYS1
|
4.5
|
10.9
|
0.6
|
|
CA
|
A:LYS1
|
4.5
|
11.8
|
0.4
|
|
CB
|
A:VAL2
|
4.5
|
11.7
|
1.0
|
|
C
|
A:LYS1
|
4.5
|
10.1
|
0.6
|
|
C
|
A:LYS1
|
4.6
|
10.7
|
0.4
|
|
N
|
A:LYS1
|
4.6
|
12.3
|
0.4
|
|
N
|
A:LYS1
|
4.7
|
10.9
|
0.6
|
|
NE2
|
A:GLN41
|
4.9
|
9.7
|
1.0
|
|
HE22
|
A:GLN41
|
4.9
|
11.7
|
1.0
|
|
CA
|
A:VAL2
|
4.9
|
10.5
|
1.0
|
|
H1
|
A:LYS1
|
5.0
|
14.7
|
0.4
|
|
H1
|
A:LYS1
|
5.0
|
13.0
|
0.6
|
|
Reference:
P.J.B.Pereira,
P.J.B.Pereira.
N/A N/A.
Page generated: Mon Jul 29 14:39:01 2024
|
