Atomistry » Chlorine » PDB 6rot-6rzp » 6rt9
Atomistry »
  Chlorine »
    PDB 6rot-6rzp »
      6rt9 »

Chlorine in PDB 6rt9: Orthorhombic Lysozyme Grown with 300G/L Sucrose

Enzymatic activity of Orthorhombic Lysozyme Grown with 300G/L Sucrose

All present enzymatic activity of Orthorhombic Lysozyme Grown with 300G/L Sucrose:
3.2.1.17;

Protein crystallography data

The structure of Orthorhombic Lysozyme Grown with 300G/L Sucrose, PDB code: 6rt9 was solved by P.J.B.Pereira, C.Ferreira, P.M.Martins, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.79 / 1.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 30.065, 56.091, 72.455, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 22.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Orthorhombic Lysozyme Grown with 300G/L Sucrose (pdb code 6rt9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Orthorhombic Lysozyme Grown with 300G/L Sucrose, PDB code: 6rt9:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 6rt9

Go back to Chlorine Binding Sites List in 6rt9
Chlorine binding site 1 out of 3 in the Orthorhombic Lysozyme Grown with 300G/L Sucrose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Orthorhombic Lysozyme Grown with 300G/L Sucrose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:16.8
occ:1.00
NH2 A:ARG125 3.3 18.0 1.0
NH1 A:ARG125 3.4 19.2 1.0
CB A:ALA122 3.8 15.9 1.0
CZ A:ARG125 3.8 18.5 1.0

Chlorine binding site 2 out of 3 in 6rt9

Go back to Chlorine Binding Sites List in 6rt9
Chlorine binding site 2 out of 3 in the Orthorhombic Lysozyme Grown with 300G/L Sucrose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Orthorhombic Lysozyme Grown with 300G/L Sucrose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:26.1
occ:1.00
O A:HOH355 2.5 50.9 1.0
O A:HOH484 2.7 37.4 1.0
OG A:SER24 3.0 18.5 1.0
N A:GLY26 3.0 13.5 1.0
CB A:SER24 3.4 16.4 1.0
CA A:GLY26 3.5 9.1 1.0
CA A:GLN121 3.6 14.7 1.0
N A:LEU25 4.0 9.0 1.0
N A:GLN121 4.0 15.1 1.0
O A:HOH391 4.0 27.8 1.0
CB A:GLN121 4.1 20.8 1.0
CD1 A:ILE124 4.1 21.2 1.0
C A:SER24 4.1 11.4 1.0
C A:LEU25 4.2 11.8 1.0
O A:VAL120 4.2 12.3 1.0
C A:VAL120 4.3 13.0 1.0
O A:HOH487 4.3 28.7 1.0
CG A:GLN121 4.3 29.3 1.0
CG1 A:ILE124 4.4 18.7 1.0
CA A:SER24 4.4 10.6 1.0
CG2 A:VAL120 4.4 12.4 1.0
CA A:LEU25 4.5 8.9 1.0
C A:GLY26 4.6 10.8 1.0
O A:SER24 4.6 11.9 1.0
N A:ASN27 4.7 10.1 1.0
C A:GLN121 4.7 16.2 1.0
O A:GLN121 4.8 16.6 1.0
CB A:LEU25 4.9 8.0 1.0

Chlorine binding site 3 out of 3 in 6rt9

Go back to Chlorine Binding Sites List in 6rt9
Chlorine binding site 3 out of 3 in the Orthorhombic Lysozyme Grown with 300G/L Sucrose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Orthorhombic Lysozyme Grown with 300G/L Sucrose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:24.1
occ:1.00
O A:HOH456 2.8 37.6 1.0
NH1 A:ARG114 3.5 27.0 0.5
O A:HOH311 3.5 39.3 1.0
CE1 A:PHE34 3.9 19.3 1.0
CD1 A:PHE34 4.7 21.8 1.0
CZ A:ARG114 4.8 20.2 0.5
CZ A:PHE34 4.8 18.6 1.0
CE A:LYS33 4.9 29.7 1.0

Reference:

C.Ferreira, P.J.B.Pereira, P.M.Martins. Orthorhombic Lysozyme Grown with 300G/L Sucrose To Be Published.
Page generated: Mon Jul 29 14:39:09 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy