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Chlorine in PDB 6rta: Tetragonal Lysozyme Grown with 300G/L Ficoll

Enzymatic activity of Tetragonal Lysozyme Grown with 300G/L Ficoll

All present enzymatic activity of Tetragonal Lysozyme Grown with 300G/L Ficoll:
3.2.1.17;

Protein crystallography data

The structure of Tetragonal Lysozyme Grown with 300G/L Ficoll, PDB code: 6rta was solved by P.J.B.Pereira, C.Ferreira, P.M.Martins, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.61 / 1.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.662, 78.662, 37.105, 90.00, 90.00, 90.00
R / Rfree (%) 16.4 / 19.1

Other elements in 6rta:

The structure of Tetragonal Lysozyme Grown with 300G/L Ficoll also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Tetragonal Lysozyme Grown with 300G/L Ficoll (pdb code 6rta). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Tetragonal Lysozyme Grown with 300G/L Ficoll, PDB code: 6rta:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6rta

Go back to Chlorine Binding Sites List in 6rta
Chlorine binding site 1 out of 2 in the Tetragonal Lysozyme Grown with 300G/L Ficoll


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Tetragonal Lysozyme Grown with 300G/L Ficoll within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:17.2
occ:1.00
OH A:TYR23 3.0 13.6 1.0
O A:HOH361 3.3 15.2 1.0
O A:HOH339 3.3 39.0 1.0
CZ A:TYR23 3.7 15.1 1.0
CE2 A:TYR23 3.7 12.1 1.0
CA A:GLY104 4.1 11.7 1.0
O A:ARG21 4.7 15.7 1.0
N A:GLY104 4.7 14.7 1.0
CE1 A:TYR23 4.9 15.0 1.0
CD2 A:TYR23 4.9 11.4 1.0

Chlorine binding site 2 out of 2 in 6rta

Go back to Chlorine Binding Sites List in 6rta
Chlorine binding site 2 out of 2 in the Tetragonal Lysozyme Grown with 300G/L Ficoll


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Tetragonal Lysozyme Grown with 300G/L Ficoll within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:22.7
occ:1.00
OG A:SER24 3.1 19.8 1.0
N A:GLY26 3.1 11.8 1.0
CA A:GLY26 3.4 14.4 1.0
CB A:SER24 3.5 21.7 1.0
CA A:GLN121 3.6 13.8 1.0
CD1 A:ILE124 3.7 32.7 1.0
N A:GLN121 4.0 13.9 1.0
CB A:GLN121 4.0 24.8 1.0
O A:VAL120 4.2 17.4 1.0
CG1 A:ILE124 4.2 24.3 1.0
CG A:GLN121 4.2 40.3 1.0
C A:VAL120 4.2 16.3 1.0
N A:LEU25 4.3 11.9 1.0
CG2 A:VAL120 4.3 12.2 1.0
C A:LEU25 4.4 14.4 1.0
C A:SER24 4.4 15.6 1.0
C A:GLY26 4.5 16.5 1.0
CA A:SER24 4.6 18.7 1.0
N A:ASN27 4.6 11.7 1.0
CA A:LEU25 4.8 9.5 1.0
C A:GLN121 4.8 15.7 1.0
O A:SER24 4.9 15.4 1.0

Reference:

C.Ferreira, P.J.B.Pereira, P.M.Martins. Tetragonal Lysozyme Grown with 300G/L Sucrose To Be Published.
Page generated: Mon Jul 29 14:39:21 2024

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