Chlorine in PDB 6rta: Tetragonal Lysozyme Grown with 300G/L Ficoll

Enzymatic activity of Tetragonal Lysozyme Grown with 300G/L Ficoll

All present enzymatic activity of Tetragonal Lysozyme Grown with 300G/L Ficoll:
3.2.1.17;

Protein crystallography data

The structure of Tetragonal Lysozyme Grown with 300G/L Ficoll, PDB code: 6rta was solved by P.J.B.Pereira, C.Ferreira, P.M.Martins, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.61 / 1.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.662, 78.662, 37.105, 90.00, 90.00, 90.00
R / Rfree (%) 16.4 / 19.1

Other elements in 6rta:

The structure of Tetragonal Lysozyme Grown with 300G/L Ficoll also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Tetragonal Lysozyme Grown with 300G/L Ficoll (pdb code 6rta). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Tetragonal Lysozyme Grown with 300G/L Ficoll, PDB code: 6rta:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6rta

Go back to Chlorine Binding Sites List in 6rta
Chlorine binding site 1 out of 2 in the Tetragonal Lysozyme Grown with 300G/L Ficoll


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Tetragonal Lysozyme Grown with 300G/L Ficoll within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:17.2
occ:1.00
OH A:TYR23 3.0 13.6 1.0
O A:HOH361 3.3 15.2 1.0
O A:HOH339 3.3 39.0 1.0
CZ A:TYR23 3.7 15.1 1.0
CE2 A:TYR23 3.7 12.1 1.0
CA A:GLY104 4.1 11.7 1.0
O A:ARG21 4.7 15.7 1.0
N A:GLY104 4.7 14.7 1.0
CE1 A:TYR23 4.9 15.0 1.0
CD2 A:TYR23 4.9 11.4 1.0

Chlorine binding site 2 out of 2 in 6rta

Go back to Chlorine Binding Sites List in 6rta
Chlorine binding site 2 out of 2 in the Tetragonal Lysozyme Grown with 300G/L Ficoll


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Tetragonal Lysozyme Grown with 300G/L Ficoll within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:22.7
occ:1.00
OG A:SER24 3.1 19.8 1.0
N A:GLY26 3.1 11.8 1.0
CA A:GLY26 3.4 14.4 1.0
CB A:SER24 3.5 21.7 1.0
CA A:GLN121 3.6 13.8 1.0
CD1 A:ILE124 3.7 32.7 1.0
N A:GLN121 4.0 13.9 1.0
CB A:GLN121 4.0 24.8 1.0
O A:VAL120 4.2 17.4 1.0
CG1 A:ILE124 4.2 24.3 1.0
CG A:GLN121 4.2 40.3 1.0
C A:VAL120 4.2 16.3 1.0
N A:LEU25 4.3 11.9 1.0
CG2 A:VAL120 4.3 12.2 1.0
C A:LEU25 4.4 14.4 1.0
C A:SER24 4.4 15.6 1.0
C A:GLY26 4.5 16.5 1.0
CA A:SER24 4.6 18.7 1.0
N A:ASN27 4.6 11.7 1.0
CA A:LEU25 4.8 9.5 1.0
C A:GLN121 4.8 15.7 1.0
O A:SER24 4.9 15.4 1.0

Reference:

C.Ferreira, P.J.B.Pereira, P.M.Martins. Tetragonal Lysozyme Grown with 300G/L Sucrose To Be Published.
Page generated: Sat Dec 12 13:37:23 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy