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Chlorine in PDB 6rxi: In-Flow Serial Synchrotron Crystallography Using A 3D-Printed Microfluidic Device (3D-Mixd): Lysozyme

Enzymatic activity of In-Flow Serial Synchrotron Crystallography Using A 3D-Printed Microfluidic Device (3D-Mixd): Lysozyme

All present enzymatic activity of In-Flow Serial Synchrotron Crystallography Using A 3D-Printed Microfluidic Device (3D-Mixd): Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of In-Flow Serial Synchrotron Crystallography Using A 3D-Printed Microfluidic Device (3D-Mixd): Lysozyme, PDB code: 6rxi was solved by D.C.F.Monteiro, D.Von Stetten, A.R.Pearson, M.Trebbin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.36 / 2.00
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.700, 79.700, 38.550, 90.00, 90.00, 90.00
R / Rfree (%) 15.8 / 20.1

Other elements in 6rxi:

The structure of In-Flow Serial Synchrotron Crystallography Using A 3D-Printed Microfluidic Device (3D-Mixd): Lysozyme also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the In-Flow Serial Synchrotron Crystallography Using A 3D-Printed Microfluidic Device (3D-Mixd): Lysozyme (pdb code 6rxi). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the In-Flow Serial Synchrotron Crystallography Using A 3D-Printed Microfluidic Device (3D-Mixd): Lysozyme, PDB code: 6rxi:

Chlorine binding site 1 out of 1 in 6rxi

Go back to Chlorine Binding Sites List in 6rxi
Chlorine binding site 1 out of 1 in the In-Flow Serial Synchrotron Crystallography Using A 3D-Printed Microfluidic Device (3D-Mixd): Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of In-Flow Serial Synchrotron Crystallography Using A 3D-Printed Microfluidic Device (3D-Mixd): Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:39.9
occ:1.00
 OH A:TYR23 2.9 31.8 1.0
CZ A:TYR23 3.7 29.9 1.0
CE2 A:TYR23 3.7 32.9 1.0
CA A:GLY104 4.1 32.7 1.0
N A:GLY104 4.7 30.9 1.0
O A:ARG21 4.7 33.5 1.0
O A:HOH309 4.8 40.9 1.0
CE1 A:TYR23 4.9 31.1 1.0
CD2 A:TYR23 4.9 31.6 1.0

Reference:

D.C.F.Monteiro, D.Von Stetten, C.Stohrer, M.Sans, A.R.Pearson, G.Santoni, P.Van Der Linden, M.Trebbin. 3D-Mixd: 3D-Printed X-Ray-Compatible Microfluidic Devices For Rapid, Low-Consumption Serial Synchrotron Crystallography Data Collection in Flow. Iucrj V. 7 207 2020.
ISSN: ESSN 2052-2525
PubMed: 32148849
DOI: 10.1107/S2052252519016865
Page generated: Mon Jul 29 14:43:16 2024

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