Chlorine in PDB 6smc: Mouse Interleukin-12 Subunit Beta - P80 Homodimer in Space Group P1

Protein crystallography data

The structure of Mouse Interleukin-12 Subunit Beta - P80 Homodimer in Space Group P1, PDB code: 6smc was solved by Y.Bloch, S.N.Savvides, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.76 / 3.50
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 50.074, 96.791, 107.780, 68.59, 76.84, 85.83
R / Rfree (%) 27.9 / 31

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Mouse Interleukin-12 Subunit Beta - P80 Homodimer in Space Group P1 (pdb code 6smc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Mouse Interleukin-12 Subunit Beta - P80 Homodimer in Space Group P1, PDB code: 6smc:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6smc

Go back to Chlorine Binding Sites List in 6smc
Chlorine binding site 1 out of 2 in the Mouse Interleukin-12 Subunit Beta - P80 Homodimer in Space Group P1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Mouse Interleukin-12 Subunit Beta - P80 Homodimer in Space Group P1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:80.8
occ:1.00
H B:CYS128 3.5 0.4 1.0
HG22 B:ILE230 3.9 90.3 1.0
HB3 B:PHE225 3.9 86.8 1.0
HG1 B:THR223 3.9 99.8 1.0
HB2 B:CYS128 3.9 0.3 1.0
HG21 B:ILE230 4.0 90.3 1.0
O B:LEU126 4.1 0.9 1.0
HA B:LYS127 4.1 0.9 1.0
N B:CYS128 4.3 0.9 1.0
CG2 B:ILE230 4.4 0.5 1.0
HD2 B:PHE225 4.5 85.2 1.0
OG1 B:THR223 4.5 0.7 1.0
O B:CYS128 4.5 0.0 1.0
HB2 B:PHE225 4.6 86.8 1.0
CB B:PHE225 4.7 0.3 1.0
HG23 B:ILE230 4.7 90.3 1.0
CB B:CYS128 4.7 0.8 1.0
CD2 B:PHE225 4.9 0.2 1.0
CA B:LYS127 5.0 0.2 1.0
CA B:CYS128 5.0 0.3 1.0

Chlorine binding site 2 out of 2 in 6smc

Go back to Chlorine Binding Sites List in 6smc
Chlorine binding site 2 out of 2 in the Mouse Interleukin-12 Subunit Beta - P80 Homodimer in Space Group P1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Mouse Interleukin-12 Subunit Beta - P80 Homodimer in Space Group P1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl401

b:80.9
occ:1.00
H C:CYS128 2.9 1.0 1.0
HB2 C:CYS128 3.1 0.6 1.0
O C:LEU126 3.6 0.6 1.0
HG1 C:THR223 3.6 0.9 1.0
HG21 C:ILE230 3.6 92.6 1.0
N C:CYS128 3.7 0.7 1.0
HB3 C:PHE225 3.8 93.0 1.0
HD2 C:PHE225 3.9 92.3 1.0
HA C:LYS127 3.9 0.3 1.0
CB C:CYS128 3.9 0.7 1.0
HG22 C:ILE230 3.9 92.6 1.0
O C:CYS128 4.1 0.3 1.0
CG2 C:ILE230 4.2 0.6 1.0
OG1 C:THR223 4.2 0.8 1.0
CA C:CYS128 4.3 0.2 1.0
CD2 C:PHE225 4.3 0.1 1.0
SG C:CYS128 4.3 0.7 1.0
CB C:PHE225 4.5 0.6 1.0
HB2 C:PHE225 4.5 93.0 1.0
C C:LYS127 4.6 0.2 1.0
CG C:PHE225 4.6 0.7 1.0
CA C:LYS127 4.6 0.2 1.0
C C:CYS128 4.6 0.9 1.0
HG23 C:ILE230 4.7 92.6 1.0
HB3 C:CYS128 4.7 0.6 1.0
C C:LEU126 4.7 1.0 1.0

Reference:

Y.Bloch, S.N.Savvides. Around She Goes: the Structure of Mouse Interleukin-12 P80 To Be Published.
Page generated: Sat Dec 12 13:40:23 2020

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