Atomistry » Chlorine » PDB 6t4y-6tdh » 6t8m
Atomistry »
  Chlorine »
    PDB 6t4y-6tdh »
      6t8m »

Chlorine in PDB 6t8m: Prolyl Hydroxylase (Phd) Involved in Hypoxia Sensing By Dictyostelium Discoideum

Protein crystallography data

The structure of Prolyl Hydroxylase (Phd) Involved in Hypoxia Sensing By Dictyostelium Discoideum, PDB code: 6t8m was solved by R.Chowdhury, M.A.Mcdonough, T.Liu, I.J.Clifton, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.92 / 2.02
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 45.216, 81.781, 379.210, 90.00, 90.00, 90.00
R / Rfree (%) 22.8 / 25.7

Other elements in 6t8m:

The structure of Prolyl Hydroxylase (Phd) Involved in Hypoxia Sensing By Dictyostelium Discoideum also contains other interesting chemical elements:

Nickel (Ni) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Prolyl Hydroxylase (Phd) Involved in Hypoxia Sensing By Dictyostelium Discoideum (pdb code 6t8m). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Prolyl Hydroxylase (Phd) Involved in Hypoxia Sensing By Dictyostelium Discoideum, PDB code: 6t8m:

Chlorine binding site 1 out of 1 in 6t8m

Go back to Chlorine Binding Sites List in 6t8m
Chlorine binding site 1 out of 1 in the Prolyl Hydroxylase (Phd) Involved in Hypoxia Sensing By Dictyostelium Discoideum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Prolyl Hydroxylase (Phd) Involved in Hypoxia Sensing By Dictyostelium Discoideum within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl304

b:80.7
occ:1.00
NZ C:LYS160 3.6 61.1 1.0
OG C:SER172 3.9 66.3 1.0
O C:ILE173 4.1 62.3 1.0
CE C:LYS160 4.2 61.0 1.0
O C:SER172 4.3 67.1 1.0
C C:ILE173 4.7 62.2 1.0
CD C:LYS160 4.7 59.1 1.0

Reference:

T.Liu, M.I.Abboud, R.Chowdhury, A.Tumber, A.P.Hardy, K.Lippl, C.T.Lohans, E.Pires, J.Wickens, M.A.Mcdonough, C.M.West, C.J.Schofield. Biochemical and Biophysical Analyses of Hypoxia Sensing Prolyl Hydroxylases From Dictyostelium Discoideum and Toxoplasma Gondii. J.Biol.Chem. 2020.
ISSN: ESSN 1083-351X
PubMed: 32934009
DOI: 10.1074/JBC.RA120.013998
Page generated: Sat Jul 12 20:04:30 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy