Chlorine in PDB 6tly: Crystal Structure of the Unconventional Kinetochore Protein Bodo Saltans KKT2 Central Domain

Protein crystallography data

The structure of Crystal Structure of the Unconventional Kinetochore Protein Bodo Saltans KKT2 Central Domain, PDB code: 6tly was solved by G.Marciano, O.Nerusheva, M.Ishii, B.Akiyoshi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.00 / 1.80
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 38.961, 53.512, 83.294, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 22.5

Other elements in 6tly:

The structure of Crystal Structure of the Unconventional Kinetochore Protein Bodo Saltans KKT2 Central Domain also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Unconventional Kinetochore Protein Bodo Saltans KKT2 Central Domain (pdb code 6tly). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Unconventional Kinetochore Protein Bodo Saltans KKT2 Central Domain, PDB code: 6tly:

Chlorine binding site 1 out of 1 in 6tly

Go back to Chlorine Binding Sites List in 6tly
Chlorine binding site 1 out of 1 in the Crystal Structure of the Unconventional Kinetochore Protein Bodo Saltans KKT2 Central Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Unconventional Kinetochore Protein Bodo Saltans KKT2 Central Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl706

b:64.0
occ:0.50
NH2 A:ARG583 3.5 49.2 1.0
O A:HOH859 3.7 48.4 1.0
O A:HOH829 3.9 45.4 1.0
NE A:ARG583 3.9 45.0 1.0
CZ A:ARG583 4.2 48.8 1.0
CE A:LYS650 4.3 40.9 1.0
NZ A:LYS650 4.8 44.7 1.0

Reference:

G.Marciano, O.Nerusheva, M.Ishii, B.Akiyoshi. Unconventional Kinetochore Kinases KKT2 and KKT3 Have A Unique Zinc Finger That Promotes Their Kinetochore Localization Biorxiv 2019.
DOI: 10.1101/2019.12.13.875419V1
Page generated: Sat Dec 12 13:45:01 2020

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