Chlorine in PDB 6u2m: Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635

Protein crystallography data

The structure of Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635, PDB code: 6u2m was solved by C.Deo, E.R.Schreiter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 122.58 / 2.00
Space group P 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 92.560, 60.662, 122.600, 90.00, 91.02, 90.00
R / Rfree (%) 18.6 / 22.6

Other elements in 6u2m:

The structure of Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635 also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Silicon (Si) 2 atoms
Calcium (Ca) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635 (pdb code 6u2m). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635, PDB code: 6u2m:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6u2m

Go back to Chlorine Binding Sites List in 6u2m
Chlorine binding site 1 out of 2 in the Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:38.8
occ:1.00
NE1 A:TRP305 3.2 34.0 1.0
ND2 A:ASN239 3.2 39.1 1.0
C27 A:PUJ600 3.4 57.6 1.0
N A:PRO89 3.6 39.2 1.0
CA A:PRO89 3.7 36.0 1.0
CD1 A:TRP305 3.7 34.0 1.0
CD A:PRO89 3.7 41.3 1.0
C A:PHE88 3.7 38.4 1.0
CB A:PHE88 3.8 37.8 1.0
CB A:ASN239 3.8 36.1 1.0
CB A:PRO89 3.9 39.4 1.0
CD1 A:LEU92 3.9 47.8 1.0
CZ A:PHE51 3.9 48.5 1.0
C26 A:PUJ600 4.0 61.1 1.0
O A:PHE88 4.0 38.0 1.0
CG A:ASN239 4.0 37.0 1.0
CG A:LEU92 4.3 44.3 1.0
CG A:PRO89 4.4 42.1 1.0
CD2 A:LEU92 4.4 44.0 1.0
CA A:PHE88 4.4 36.3 1.0
CE2 A:TRP305 4.5 35.2 1.0
CE2 A:PHE51 4.5 49.7 1.0
CE2 A:PHE32 4.6 58.6 1.0
CE1 A:PHE51 4.7 49.0 1.0
OD2 A:ASP304 4.8 40.8 1.0
CG A:PHE88 4.8 36.0 1.0
OD1 A:ASP304 4.9 43.0 1.0
C25 A:PUJ600 5.0 62.6 1.0

Chlorine binding site 2 out of 2 in 6u2m

Go back to Chlorine Binding Sites List in 6u2m
Chlorine binding site 2 out of 2 in the Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl601

b:39.0
occ:1.00
NE1 C:TRP305 3.2 36.7 1.0
ND2 C:ASN239 3.2 36.7 1.0
C27 C:PUJ600 3.4 68.3 1.0
N C:PRO89 3.6 36.1 1.0
CD C:PRO89 3.6 38.6 1.0
CD1 C:TRP305 3.7 35.0 1.0
CA C:PRO89 3.7 37.9 1.0
C C:PHE88 3.8 36.9 1.0
CB C:PHE88 3.8 35.5 1.0
CB C:ASN239 3.9 36.2 1.0
O C:PHE88 4.0 36.7 1.0
CB C:PRO89 4.0 41.1 1.0
CD1 C:LEU92 4.0 44.3 1.0
CZ C:PHE51 4.0 47.0 1.0
CG C:ASN239 4.1 37.0 1.0
CG C:LEU92 4.1 42.4 1.0
C26 C:PUJ600 4.2 72.3 1.0
CD2 C:LEU92 4.2 43.4 1.0
CG C:PRO89 4.3 38.7 1.0
CA C:PHE88 4.4 34.7 1.0
C25 C:PUJ600 4.4 71.5 1.0
CE2 C:TRP305 4.5 35.9 1.0
CE2 C:PHE32 4.5 53.4 1.0
CE2 C:PHE51 4.5 51.8 1.0
OD2 C:ASP304 4.7 43.5 1.0
CG C:PHE88 4.8 36.2 1.0
OD1 C:ASP304 4.9 47.7 1.0
CZ C:PHE32 4.9 54.9 1.0
CE1 C:PHE51 4.9 47.4 1.0

Reference:

C.Deo, L.D.Lavis, E.R.Schreiter. Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2 To Be Published.
Page generated: Sat Dec 12 13:47:07 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy