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Chlorine in PDB 6uai: Imidazole-Triggered Ras-Specific Subtilisin SUBT_BACAM Complexed with Ysam Peptide

Protein crystallography data

The structure of Imidazole-Triggered Ras-Specific Subtilisin SUBT_BACAM Complexed with Ysam Peptide, PDB code: 6uai was solved by E.A.Toth, P.N.Bryan, J.Orban, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.50 / 1.20
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 58.640, 58.640, 125.170, 90.00, 90.00, 90.00
R / Rfree (%) 10.9 / 12.5

Other elements in 6uai:

The structure of Imidazole-Triggered Ras-Specific Subtilisin SUBT_BACAM Complexed with Ysam Peptide also contains other interesting chemical elements:

Sodium (Na) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Imidazole-Triggered Ras-Specific Subtilisin SUBT_BACAM Complexed with Ysam Peptide (pdb code 6uai). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Imidazole-Triggered Ras-Specific Subtilisin SUBT_BACAM Complexed with Ysam Peptide, PDB code: 6uai:

Chlorine binding site 1 out of 1 in 6uai

Go back to Chlorine Binding Sites List in 6uai
Chlorine binding site 1 out of 1 in the Imidazole-Triggered Ras-Specific Subtilisin SUBT_BACAM Complexed with Ysam Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Imidazole-Triggered Ras-Specific Subtilisin SUBT_BACAM Complexed with Ysam Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
S:Cl303

b:7.0
occ:1.00
OH B:TYR277 3.0 8.5 1.0
OH S:TYR171 3.1 10.9 1.0
N S:SER132 3.3 7.1 1.0
CB S:TYR167 3.5 5.5 1.0
CA S:GLY131 3.5 12.4 0.5
CG1 S:VAL135 3.5 6.5 1.0
CE2 S:TYR171 3.5 8.6 1.0
CB S:VAL135 3.6 6.0 1.0
CZ S:TYR171 3.7 8.3 1.0
CE2 B:TYR277 3.7 6.4 1.0
CZ B:TYR277 3.8 7.2 1.0
C S:GLY131 3.9 14.6 0.5
CA S:GLY131 4.0 14.0 0.5
O S:SER132 4.0 6.8 1.0
CA S:PRO168 4.1 5.2 1.0
N S:PRO168 4.1 4.6 1.0
CB S:PRO168 4.1 6.4 1.0
C S:GLY131 4.1 12.1 0.5
C S:TYR167 4.1 4.4 1.0
CA S:SER132 4.2 5.7 1.0
CB S:SER132 4.2 5.8 1.0
CG2 S:VAL135 4.2 6.9 1.0
CA S:TYR167 4.4 4.7 1.0
CG S:TYR167 4.4 6.7 1.0
C S:SER132 4.5 6.2 1.0
O S:TYR167 4.6 5.4 1.0
CD1 S:TYR167 4.6 9.1 1.0
N S:GLY131 4.7 13.5 0.5
CD2 S:TYR171 4.7 7.5 1.0
CA S:VAL135 4.8 6.0 1.0
N S:LYS136 4.8 6.0 1.0
CD S:PRO168 4.8 5.5 1.0
O S:SER130 4.9 15.2 0.5
C S:VAL135 4.9 5.7 1.0
CG S:PRO168 5.0 6.0 1.0

Reference:

E.A.Toth, P.N.Bryan. A Programmable Proteolytic Machine That Specifically Degrades Oncogenic Ras in Vitro, in Engineered Bacteria, and in Human Cell Culture To Be Published.
Page generated: Mon Jul 29 15:46:46 2024

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