Chlorine in PDB 6ucl: Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal

The structure of Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal, PDB code: 6ucl was solved by Z.Yin, M.Machius, G.Rudenko, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.78 / 2.21
Space group	F 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	39.506, 51.956, 150.454, 90.00, 90.00, 90.00
R / Rfree (%)	27.1 / 28.7

The binding sites of Chlorine atom in the Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal (pdb code 6ucl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal, PDB code: 6ucl:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl301 b:42.3 occ:1.00 HE A:ARG177 2.7 23.7 1.0 HH21 A:ARG177 2.8 22.6 1.0 HH12 A:ARG176 2.8 41.8 1.0 NE A:ARG177 3.5 19.3 1.0 NH1 A:ARG176 3.5 34.4 1.0 NH2 A:ARG177 3.6 18.4 1.0 HH11 A:ARG176 3.6 41.8 1.0 CZ A:ARG177 4.0 18.8 1.0 HG2 A:ARG177 4.2 20.2 1.0 HH22 A:ARG177 4.3 22.6 1.0 HG3 A:ARG177 4.4 20.2 1.0 HH22 A:ARG176 4.6 47.0 1.0 CG A:ARG177 4.6 16.4 1.0 CD A:ARG177 4.6 15.9 1.0 CZ A:ARG176 4.7 40.5 1.0

Chlorine binding site 2 out of 3 in the Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl302 b:61.0 occ:1.00 HD21 A:LEU179 2.9 32.1 1.0 HE A:ARG175 3.1 63.7 1.0 HG3 A:ARG175 3.2 47.0 1.0 HH12 A:ARG182 3.5 52.7 1.0 O A:HOH410 3.6 51.5 1.0 CD2 A:LEU179 3.7 26.3 1.0 NE A:ARG175 3.7 52.7 1.0 HD23 A:LEU179 3.8 32.1 1.0 HG2 A:ARG175 3.9 47.0 1.0 CG A:ARG175 3.9 38.7 1.0 HG A:LEU179 4.0 19.1 1.0 NH1 A:ARG182 4.1 43.5 1.0 HD11 A:LEU179 4.1 31.7 1.0 HH21 A:ARG175 4.2 68.0 1.0 HH11 A:ARG182 4.2 52.7 1.0 CD A:ARG175 4.3 52.0 1.0 CG A:LEU179 4.4 15.5 1.0 HD2 A:ARG175 4.5 62.9 1.0 HD22 A:LEU179 4.5 32.1 1.0 CZ A:ARG175 4.6 46.1 1.0 NH2 A:ARG175 4.7 56.3 1.0 CD1 A:LEU179 4.8 26.0 1.0 HH22 A:ARG182 4.9 67.7 1.0

Chlorine binding site 3 out of 3 in the Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Transcription Factor Deltafosb Bzip Domain Self-Assembly, Type-I Crystal within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl303 b:74.3 occ:1.00 HH22 A:ARG176 3.2 47.0 1.0 HH21 A:ARG176 3.7 47.0 1.0 NH2 A:ARG176 3.8 38.8 1.0 HG3 A:ARG173 3.9 23.1 1.0 HD3 A:ARG173 4.4 37.9 1.0 O A:HOH405 4.5 24.6 1.0 HD2 A:ARG173 4.6 37.9 1.0 CG A:ARG173 4.7 18.8 1.0 HB2 A:ARG173 4.7 18.3 1.0 CD A:ARG173 4.8 31.2 1.0

Y.Zhou, H.Venkannagari, H.Lynch, G.Aglyamova, M.Bhandari, M.Machius, E.J.Nestler, A.J.Robison, G.Rudenko. Self-Assembly of the Bzip Transcription Factor Delta-Fosb Curr Res Struct Biol 2019.
DOI: 10.1016/J.CRSTBI.2019.12.001