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Chlorine in PDB 6w2o: Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia

Enzymatic activity of Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia

All present enzymatic activity of Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia:
4.1.1.37;

Protein crystallography data

The structure of Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia, PDB code: 6w2o was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.90 / 1.55
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 103.690, 103.690, 74.720, 90.00, 90.00, 120.00
R / Rfree (%) 15.4 / 17.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia (pdb code 6w2o). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia, PDB code: 6w2o:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6w2o

Go back to Chlorine Binding Sites List in 6w2o
Chlorine binding site 1 out of 2 in the Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl407

b:36.2
occ:1.00
O A:HOH806 3.1 20.8 1.0
N A:ARG32 3.2 15.3 1.0
NE A:ARG32 3.3 54.0 1.0
O A:HOH698 3.3 51.4 1.0
O A:HOH601 3.6 37.0 1.0
CB A:ARG32 3.8 19.2 1.0
CG A:ARG32 3.8 24.2 1.0
CD A:ARG28 3.8 42.9 1.0
CA A:GLY31 3.8 16.0 1.0
NH2 A:ARG32 4.0 71.0 1.0
C A:GLY31 4.0 16.0 1.0
CA A:ARG32 4.1 16.1 1.0
CZ A:ARG32 4.1 70.8 1.0
CD A:ARG32 4.1 30.2 1.0
CG A:ARG28 4.2 28.4 1.0
NE A:ARG28 4.2 51.3 1.0
CG A:PRO337 4.3 21.9 1.0
O A:HOH521 4.7 41.8 1.0
CD A:PRO337 4.7 22.6 1.0
O A:MET335 4.8 21.2 1.0
O A:HOH823 4.8 40.4 1.0
CZ A:ARG28 4.9 67.7 1.0

Chlorine binding site 2 out of 2 in 6w2o

Go back to Chlorine Binding Sites List in 6w2o
Chlorine binding site 2 out of 2 in the Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl408

b:24.8
occ:1.00
O A:HOH850 2.7 41.2 1.0
N A:ARG28 3.0 16.7 1.0
O1 A:EDO401 3.1 29.5 1.0
O A:HOH798 3.5 21.8 1.0
C1 A:EDO401 3.8 24.8 1.0
CA A:MET27 3.8 17.1 0.4
CA A:MET27 3.8 17.3 0.6
CA A:ARG28 3.8 15.9 1.0
CG2 A:ILE74 3.9 18.4 1.0
C A:MET27 3.9 15.5 1.0
CZ3 A:TRP25 3.9 16.3 1.0
CD1 A:ILE74 4.1 24.4 1.0
O A:HOH836 4.2 49.5 1.0
O2 A:EDO401 4.3 41.9 1.0
CB A:MET27 4.3 22.5 0.4
CH2 A:TRP25 4.5 16.3 1.0
CG1 A:ILE74 4.5 22.4 1.0
CB A:MET27 4.5 21.3 0.6
O A:HOH835 4.6 52.8 1.0
O A:HOH539 4.6 21.4 1.0
O A:LEU26 4.6 16.6 1.0
C2 A:EDO401 4.7 32.3 1.0
CB A:ILE74 4.7 19.6 1.0
N A:GLN29 4.8 14.9 1.0
CG A:MET27 4.8 22.5 0.4
CB A:ARG28 4.9 17.6 1.0
C A:ARG28 4.9 14.5 1.0
N A:MET27 5.0 16.9 1.0

Reference:

T.E.Edwards, D.R.Davies, P.S.Horanyi, D.D.Lorimer, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of Uroporphyrinogen III Decarboxylate (Heme) From Stenotrophomonas Maltophilia To Be Published.
Page generated: Mon Jul 29 16:34:40 2024

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