Atomistry » Chlorine » PDB 6wji-6wu8 » 6wmn
Atomistry »
  Chlorine »
    PDB 6wji-6wu8 »
      6wmn »

Chlorine in PDB 6wmn: Human Poly-N-Acetyl-Lactosamine Synthase Structure Demonstrates A Modular Assembly of Catalytic Subsites For Gt-A Glycosyltransferases

Enzymatic activity of Human Poly-N-Acetyl-Lactosamine Synthase Structure Demonstrates A Modular Assembly of Catalytic Subsites For Gt-A Glycosyltransferases

All present enzymatic activity of Human Poly-N-Acetyl-Lactosamine Synthase Structure Demonstrates A Modular Assembly of Catalytic Subsites For Gt-A Glycosyltransferases:
2.4.1.149;

Protein crystallography data

The structure of Human Poly-N-Acetyl-Lactosamine Synthase Structure Demonstrates A Modular Assembly of Catalytic Subsites For Gt-A Glycosyltransferases, PDB code: 6wmn was solved by R.Kadirvelraj, Z.A.Wood, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.07 / 2.04
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 67.210, 79.810, 157.790, 90.00, 97.89, 90.00
R / Rfree (%) 21.8 / 23.2

Other elements in 6wmn:

The structure of Human Poly-N-Acetyl-Lactosamine Synthase Structure Demonstrates A Modular Assembly of Catalytic Subsites For Gt-A Glycosyltransferases also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Poly-N-Acetyl-Lactosamine Synthase Structure Demonstrates A Modular Assembly of Catalytic Subsites For Gt-A Glycosyltransferases (pdb code 6wmn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Human Poly-N-Acetyl-Lactosamine Synthase Structure Demonstrates A Modular Assembly of Catalytic Subsites For Gt-A Glycosyltransferases, PDB code: 6wmn:

Chlorine binding site 1 out of 1 in 6wmn

Go back to Chlorine Binding Sites List in 6wmn
Chlorine binding site 1 out of 1 in the Human Poly-N-Acetyl-Lactosamine Synthase Structure Demonstrates A Modular Assembly of Catalytic Subsites For Gt-A Glycosyltransferases


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Poly-N-Acetyl-Lactosamine Synthase Structure Demonstrates A Modular Assembly of Catalytic Subsites For Gt-A Glycosyltransferases within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl407

b:57.4
occ:1.00
 N C:ILE73 3.1 78.5 1.0
N C:PRO72 3.4 69.2 1.0
CD C:PRO72 3.4 69.3 1.0
C C:ASN71 3.5 69.3 1.0
CA C:ASN71 3.6 66.8 1.0
N C:LEU74 3.6 82.2 1.0
CB C:ILE73 3.7 85.4 1.0
CA C:ILE73 3.8 83.7 1.0
CG C:LEU74 4.0 83.3 1.0
CD1 C:LEU74 4.0 78.1 1.0
C C:PRO72 4.1 76.4 1.0
CG1 C:ILE73 4.1 86.6 1.0
CB C:ASN71 4.1 66.7 1.0
CA C:PRO72 4.2 71.7 1.0
C C:ILE73 4.3 83.8 1.0
O C:ASN71 4.3 69.7 1.0
CB C:LEU74 4.5 77.1 1.0
CG C:PRO72 4.5 70.9 1.0
CD1 C:ILE73 4.6 89.8 1.0
CB C:PRO72 4.6 73.4 1.0
CA C:LEU74 4.7 83.2 1.0
OD1 C:ASN71 4.7 68.4 1.0
N C:ASN71 4.9 61.8 1.0
CG C:ASN71 4.9 65.5 1.0
CG2 C:ILE73 5.0 90.3 1.0
O C:TYR70 5.0 66.7 1.0

Reference:

R.Kadirvelraj, J.Y.Yang, H.W.Kim, J.H.Sanders, K.W.Moremen, Z.A.Wood. Comparison of Human Poly-N-Acetyl-Lactosamine Synthase Structure with Gt-A Fold Glycosyltransferases Supports A Modular Assembly of Catalytic Subsites. J.Biol.Chem. 2020.
ISSN: ESSN 1083-351X
PubMed: 33229435
DOI: 10.1074/JBC.RA120.015305
Page generated: Mon Jul 29 16:47:40 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy