Chlorine in PDB 6xdb: Crystal Structure of IRE1A in Complex with G-6904

Enzymatic activity of Crystal Structure of IRE1A in Complex with G-6904

All present enzymatic activity of Crystal Structure of IRE1A in Complex with G-6904:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of IRE1A in Complex with G-6904, PDB code: 6xdb was solved by H.A.Wallweber, W.Weiru, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.52 / 2.45
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 68.652, 168.441, 101.676, 90, 90, 90
R / Rfree (%) 19.3 / 22.7

Other elements in 6xdb:

The structure of Crystal Structure of IRE1A in Complex with G-6904 also contains other interesting chemical elements:

Fluorine (F) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of IRE1A in Complex with G-6904 (pdb code 6xdb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of IRE1A in Complex with G-6904, PDB code: 6xdb:

Chlorine binding site 1 out of 1 in 6xdb

Go back to Chlorine Binding Sites List in 6xdb
Chlorine binding site 1 out of 1 in the Crystal Structure of IRE1A in Complex with G-6904


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of IRE1A in Complex with G-6904 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1001

b:77.8
occ:1.00
CL35 A:N8S1001 0.0 77.8 1.0
C18 A:N8S1001 1.7 77.3 1.0
C17 A:N8S1001 2.7 75.5 1.0
C19 A:N8S1001 2.7 78.4 1.0
N16 A:N8S1001 2.9 73.7 1.0
O A:ALA597 3.5 69.6 1.0
C A:ALA597 3.6 71.7 1.0
CB A:ALA597 3.6 70.8 1.0
N A:LYS599 3.6 75.9 1.0
N A:VAL598 3.8 72.8 1.0
C A:VAL598 3.9 76.7 1.0
CB A:LYS599 3.9 82.2 1.0
C14 A:N8S1001 3.9 72.4 1.0
CG1 A:ILE642 4.0 62.8 1.0
CG1 A:VAL586 4.0 70.5 1.0
O A:ILE640 4.0 70.7 1.0
C22 A:N8S1001 4.0 79.2 1.0
C20 A:N8S1001 4.0 81.9 1.0
CD1 A:ILE642 4.0 62.0 1.0
CA A:VAL598 4.1 75.2 1.0
N36 A:N8S1001 4.2 66.5 1.0
CA A:ALA597 4.2 73.9 1.0
CA A:LYS599 4.3 79.8 1.0
O A:VAL598 4.5 76.9 1.0
C21 A:N8S1001 4.5 85.0 1.0
O15 A:N8S1001 4.5 78.0 1.0
CG2 A:ILE642 4.5 58.8 1.0
CG2 A:VAL586 4.6 69.2 1.0
N A:ILE642 4.6 73.2 1.0
C12 A:N8S1001 4.7 69.4 1.0
C11 A:N8S1001 4.8 66.8 1.0
CB A:ILE642 4.8 60.5 1.0
CG A:LYS599 4.9 87.2 1.0
CB A:VAL586 4.9 73.2 1.0
C37 A:N8S1001 4.9 64.7 1.0
C A:ILE640 5.0 73.8 1.0

Reference:

R.E.Beveridge, H.A.Wallweber, A.Ashkenazi, M.Beresini, K.R.Clark, P.Gibbons, E.Ghiro, S.Kaufman, A.Larivee, M.Leblanc, J.P.Leclerc, A.Lemire, C.Ly, J.Rudolph, J.B.Schwarz, S.Srivastava, W.Wang, L.Zhao, M.G.Braun. Identification of Braf-Sparing Amino-Thienopyrimidines with Potent IRE1 Alpha Inhibitory Activity. Acs Med.Chem.Lett. V. 11 2389 2020.
ISSN: ISSN 1948-5875
PubMed: 33335661
DOI: 10.1021/ACSMEDCHEMLETT.0C00344
Page generated: Sat Jul 10 12:24:18 2021

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