Chlorine in PDB 6xiz: Crystal Structure of Multi-Copper Oxidase From Pediococcus Acidilactici

The structure of Crystal Structure of Multi-Copper Oxidase From Pediococcus Acidilactici, PDB code: 6xiz was solved by I.Pardo, A.S.Soares, R.Collins, S.H.Partowmah, E.A.Coler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	73.65 / 1.80
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	56.06, 147.3, 65.46, 90, 98.55, 90
R / Rfree (%)	11.4 / 16.1

The structure of Crystal Structure of Multi-Copper Oxidase From Pediococcus Acidilactici also contains other interesting chemical elements:

Copper

(Cu)

8 atoms

The binding sites of Chlorine atom in the Crystal Structure of Multi-Copper Oxidase From Pediococcus Acidilactici (pdb code 6xiz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Multi-Copper Oxidase From Pediococcus Acidilactici, PDB code: 6xiz:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Multi-Copper Oxidase From Pediococcus Acidilactici


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Multi-Copper Oxidase From Pediococcus Acidilactici within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl504 b:79.6 occ:1.00 O A:HOH865 3.6 53.8 0.5 O A:LEU306 3.8 30.6 1.0 O A:PRO223 3.8 41.0 1.0 N A:LYS308 3.9 36.4 1.0 C A:LEU306 4.0 31.1 1.0 O A:ASP305 4.2 35.5 1.0 O A:HOH741 4.2 41.9 1.0 CB A:LYS308 4.2 39.8 1.0 C A:ILE307 4.3 31.7 1.0 N A:ILE307 4.3 28.6 1.0 CA A:ILE307 4.3 28.7 1.0 C A:ASP305 4.4 35.9 1.0 CA A:ASN222 4.5 35.3 1.0 C A:ASN222 4.5 37.9 1.0 N A:LEU306 4.6 32.2 1.0 CB A:ASP305 4.6 38.6 1.0 N A:PRO223 4.7 40.9 1.0 CA A:LYS308 4.7 37.4 1.0 CD A:PRO223 4.7 39.8 1.0 O A:HOH792 4.7 47.7 1.0 CA A:LEU306 4.8 34.7 1.0 O A:ASN222 4.8 39.2 1.0 C A:PRO223 4.9 37.3 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Multi-Copper Oxidase From Pediococcus Acidilactici


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Multi-Copper Oxidase From Pediococcus Acidilactici within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl505 b:85.3 occ:1.00 O B:PRO223 3.7 35.8 1.0 CB B:LYS308 4.0 41.8 1.0 C B:ASN222 4.1 35.3 1.0 N B:LYS308 4.1 33.9 1.0 CA B:ASN222 4.2 35.2 1.0 O B:LEU306 4.3 35.5 1.0 N B:PRO223 4.3 38.5 1.0 OE2 B:GLU29 4.4 68.0 1.0 O B:HOH689 4.4 39.6 1.0 O B:ASN222 4.4 39.5 1.0 C B:PRO223 4.6 35.9 1.0 C B:LEU306 4.6 33.6 1.0 C B:ILE307 4.6 30.1 1.0 CA B:ILE307 4.7 32.9 1.0 CB B:ASN222 4.7 43.1 1.0 CA B:LYS308 4.7 37.2 1.0 O B:ASP305 4.7 37.8 1.0 ND2 B:ASN222 4.8 36.3 1.0 CD B:PRO223 4.8 36.9 1.0 N B:ILE307 4.8 31.7 1.0 CB B:ASP305 5.0 37.6 1.0 C B:ASP305 5.0 35.0 1.0

I.Olmeda, P.Casino, R.E.Collins, R.Sendra, S.Callejon, J.Huesa, A.S.Soares, S.Ferrer, I.Pardo. Structural Analysis and Biochemical Properties of Laccase Enzymes From Two Pediococcus Species. Microb Biotechnol 2021.
ISSN: ISSN 1751-7915
PubMed: 33635570
DOI: 10.1111/1751-7915.13751