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Chlorine in PDB 6xqk: Crystal Structure of the D/D Domain of Pka From S. Cerevisiae

Protein crystallography data

The structure of Crystal Structure of the D/D Domain of Pka From S. Cerevisiae, PDB code: 6xqk was solved by N.Larrieux, N.Gonzalez Bardeci, F.Trajtenberg, A.Buschiazzo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 64.80 / 2.56
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 56.824, 52.134, 68.832, 90, 109.7, 90
R / Rfree (%) 21.4 / 27

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the D/D Domain of Pka From S. Cerevisiae (pdb code 6xqk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the D/D Domain of Pka From S. Cerevisiae, PDB code: 6xqk:

Chlorine binding site 1 out of 1 in 6xqk

Go back to Chlorine Binding Sites List in 6xqk
Chlorine binding site 1 out of 1 in the Crystal Structure of the D/D Domain of Pka From S. Cerevisiae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the D/D Domain of Pka From S. Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl100

b:29.6
occ:1.00
NH1 E:ARG39 3.2 26.8 1.0
CG E:GLN43 3.3 31.5 1.0
NH1 B:ARG39 3.5 25.1 1.0
NH2 E:ARG39 3.5 27.0 1.0
CG B:GLN43 3.7 25.7 1.0
CZ E:ARG39 3.8 26.7 1.0
NH2 B:ARG39 3.9 27.5 1.0
NE2 E:GLN43 3.9 35.0 1.0
CD E:GLN43 4.1 33.7 1.0
N E:GLN43 4.2 27.3 1.0
CZ B:ARG39 4.2 25.5 1.0
CA E:GLN43 4.2 28.6 1.0
CB B:GLN42 4.2 21.3 1.0
NE2 B:GLN43 4.3 30.3 1.0
CB E:GLN42 4.3 26.9 1.0
N B:GLN43 4.3 20.9 1.0
CB E:GLN43 4.3 29.3 1.0
C B:GLN42 4.4 21.8 1.0
C E:GLN42 4.4 27.3 1.0
CA B:GLN43 4.5 21.6 1.0
CD2 E:PHE46 4.5 53.0 1.0
O B:GLN42 4.6 22.9 1.0
CD B:GLN43 4.6 29.1 1.0
CE2 E:PHE46 4.6 54.1 1.0
CB B:GLN43 4.7 23.4 1.0
O E:GLN42 4.7 29.1 1.0
O E:ARG39 4.9 22.4 1.0
CA B:GLN42 5.0 21.5 1.0

Reference:

N.Gonzalez Bardeci, E.Tofolon, F.Trajtenberg, J.Caramelo, N.Larrieux, S.Rossi, A.Buschiazzo, S.Moreno. The Crystal Structure of Yeast Regulatory Subunit Reveals Key Evolutionary Insights Into Protein Kinase A Oligomerization J.Struct.Biol. 2021.
ISSN: ESSN 1095-8657
DOI: 10.1016/J.JSB.2021.107732
Page generated: Mon Jul 29 17:19:44 2024

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