Chlorine in PDB 6xrx: Crystal Structure of the Mosquito Protein AZ1 As An Mbp Fusion

Protein crystallography data

The structure of Crystal Structure of the Mosquito Protein AZ1 As An Mbp Fusion, PDB code: 6xrx was solved by L.C.Pedersen, G.A.Mueller, A.C.Y.Foo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.82 / 1.95
Space group P 62
Cell size a, b, c (Å), α, β, γ (°) 113.013, 113.013, 83.442, 90, 90, 120
R / Rfree (%) 17.7 / 20.1

Other elements in 6xrx:

The structure of Crystal Structure of the Mosquito Protein AZ1 As An Mbp Fusion also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Mosquito Protein AZ1 As An Mbp Fusion (pdb code 6xrx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Mosquito Protein AZ1 As An Mbp Fusion, PDB code: 6xrx:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6xrx

Go back to Chlorine Binding Sites List in 6xrx
Chlorine binding site 1 out of 2 in the Crystal Structure of the Mosquito Protein AZ1 As An Mbp Fusion


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Mosquito Protein AZ1 As An Mbp Fusion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1304

b:32.0
occ:1.00
O A:HOH1839 2.5 26.4 1.0
O A:HOH1696 3.3 18.1 1.0
N A:TYR210 3.3 13.9 1.0
ND2 A:ASN150 3.5 13.5 1.0
CB A:TYR210 3.6 14.9 1.0
CB A:ASP209 3.6 19.8 1.0
OD1 A:ASN150 3.7 14.6 1.0
CG A:ASN150 3.9 15.0 1.0
CA A:TYR210 4.1 14.4 1.0
CA A:ASP209 4.2 17.1 1.0
C A:ASP209 4.3 15.1 1.0
CB A:GLN152 4.4 18.2 1.0
CG A:ASP209 4.5 20.0 1.0
O A:HOH1738 4.5 48.2 1.0
CG A:GLN152 4.6 17.6 1.0
O A:HOH1797 4.7 8.5 1.0
CG A:GLU153 4.7 14.3 1.0
OD2 A:ASP209 4.8 21.1 1.0
CG A:TYR210 5.0 15.5 1.0
O A:HOH1721 5.0 39.5 1.0

Chlorine binding site 2 out of 2 in 6xrx

Go back to Chlorine Binding Sites List in 6xrx
Chlorine binding site 2 out of 2 in the Crystal Structure of the Mosquito Protein AZ1 As An Mbp Fusion


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Mosquito Protein AZ1 As An Mbp Fusion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1305

b:42.1
occ:1.00
N A:ALA1093 3.4 22.6 1.0
CB A:ALA1093 3.9 23.8 1.0
CA A:ALA1093 4.2 22.3 1.0
CA A:LEU1092 4.2 23.4 1.0
C A:LEU1092 4.3 21.7 1.0
CD2 A:LEU1092 4.5 24.6 1.0
O A:ASP1091 4.5 28.2 1.0
CE A:LYS1026 4.5 45.5 1.0
O A:HOH1769 4.7 34.4 1.0
C A:ALA1093 4.9 20.7 1.0
O A:ALA1093 5.0 17.2 1.0
CB A:LEU1092 5.0 22.8 1.0

Reference:

A.C.Y.Foo, P.M.Thompson, S.H.Chen, R.Jadi, B.Lupo, E.F.Derose, S.Arora, V.C.Placentra, L.Premkumar, L.Perera, L.C.Pedersen, N.Martin, G.A.Mueller. The Mosquito Protein AEG12 Displays Both Cytolytic and Antiviral Properties Via A Common Lipid Transfer Mechanism. Proc.Natl.Acad.Sci.Usa V. 118 2021.
ISSN: ESSN 1091-6490
PubMed: 33688047
DOI: 10.1073/PNAS.2019251118
Page generated: Sat Apr 3 14:17:37 2021

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