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Chlorine in PDB 6y27: Crystal Structure of Hla-B2709 Complexed with the Nona-Peptide Ma

Protein crystallography data

The structure of Crystal Structure of Hla-B2709 Complexed with the Nona-Peptide Ma, PDB code: 6y27 was solved by B.Loll, C.Rueckert, B.-U.Ziegler, A.Ziegler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.77 / 1.38
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.060, 82.720, 110.310, 90.00, 90.00, 90.00
R / Rfree (%) 15.8 / 19.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Hla-B2709 Complexed with the Nona-Peptide Ma (pdb code 6y27). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Hla-B2709 Complexed with the Nona-Peptide Ma, PDB code: 6y27:

Chlorine binding site 1 out of 1 in 6y27

Go back to Chlorine Binding Sites List in 6y27
Chlorine binding site 1 out of 1 in the Crystal Structure of Hla-B2709 Complexed with the Nona-Peptide Ma


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Hla-B2709 Complexed with the Nona-Peptide Ma within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:31.6
occ:1.00
O A:HOH552 3.1 17.9 1.0
O A:HOH524 3.3 25.4 1.0
NZ A:LYS68 3.3 21.7 0.6
CZ A:PHE36 3.9 14.3 1.0
CG A:LYS68 4.0 15.5 0.4
CG A:LYS68 4.1 16.8 0.6
CB A:SER38 4.2 14.9 1.0
CB A:PRO43 4.2 19.7 1.0
CE A:LYS68 4.2 21.4 0.6
CG A:PRO43 4.3 19.8 1.0
CE1 A:PHE36 4.4 14.1 1.0
CA A:SER38 4.5 14.2 1.0
CB A:LYS68 4.7 16.1 0.6
CD A:LYS68 4.7 19.1 0.6
CB A:LYS68 4.8 15.5 0.4
CD A:LYS68 4.8 17.9 0.4
CE A:LYS68 4.8 19.4 0.4
CA A:LYS68 4.8 15.2 1.0
O A:SER38 4.8 16.3 1.0
CE2 A:PHE36 5.0 14.5 1.0

Reference:

B.Loll, C.Rueckert, B.-U.Ziegler, A.Ziegler. A Central Peptide Residue Can Control Mhc Polymorphism-Dependent Antigen Presentation To Be Published.
Page generated: Mon Jul 29 17:29:09 2024

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