Atomistry » Chlorine » PDB 6ynm-6ywo » 6yoo
Atomistry »
  Chlorine »
    PDB 6ynm-6ywo »
      6yoo »

Chlorine in PDB 6yoo: Structure of SAMM50 Lir Bound to GABARAPL1

Protein crystallography data

The structure of Structure of SAMM50 Lir Bound to GABARAPL1, PDB code: 6yoo was solved by S.Mouilleron, Z.Wenxin, T.Johansen, S.Tooze, Y.P.Abudu, T.Lamark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.76 / 1.06
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 43.98, 54.04, 62.07, 90, 90, 90
R / Rfree (%) 13.4 / 14.8

Other elements in 6yoo:

The structure of Structure of SAMM50 Lir Bound to GABARAPL1 also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of SAMM50 Lir Bound to GABARAPL1 (pdb code 6yoo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of SAMM50 Lir Bound to GABARAPL1, PDB code: 6yoo:

Chlorine binding site 1 out of 1 in 6yoo

Go back to Chlorine Binding Sites List in 6yoo
Chlorine binding site 1 out of 1 in the Structure of SAMM50 Lir Bound to GABARAPL1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of SAMM50 Lir Bound to GABARAPL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:19.5
occ:1.00
ZN A:ZN203 2.2 15.8 1.0
HB3 A:TYR13 2.7 17.9 0.5
HB3 A:HIS9 2.8 15.8 1.0
O A:HOH317 3.2 15.9 1.0
HB3 A:TYR13 3.2 17.3 0.5
HB2 A:TYR13 3.3 17.3 0.5
HB2 A:TYR13 3.4 17.9 0.5
CB A:TYR13 3.5 14.9 0.5
ND1 A:HIS9 3.5 14.0 1.0
OE2 B:GLU25 3.6 23.7 1.0
OE1 B:GLU25 3.6 22.8 1.0
CB A:HIS9 3.7 13.2 1.0
CB A:TYR13 3.7 14.4 0.5
HD2 A:PRO10 3.8 16.9 1.0
CG A:HIS9 3.9 13.4 1.0
CD B:GLU25 3.9 22.9 1.0
C A:TYR13 4.0 13.1 1.0
O A:TYR13 4.1 13.5 1.0
HA A:ARG14 4.1 14.7 1.0
O B:HOH102 4.1 34.9 1.0
N A:ARG14 4.2 12.4 1.0
HD2 A:TYR13 4.2 21.2 0.5
HG2 A:ARG14 4.2 15.0 1.0
HA A:HIS9 4.2 15.6 1.0
HB2 A:HIS9 4.3 15.8 1.0
CA A:TYR13 4.4 13.6 0.5
O A:HOH353 4.4 24.3 1.0
H A:ARG14 4.4 14.9 1.0
HH A:TYR5 4.4 17.6 1.0
CA A:TYR13 4.4 13.7 0.5
CG A:TYR13 4.5 16.1 0.5
OE1 A:GLU17 4.5 16.7 1.0
CA A:HIS9 4.5 12.9 1.0
CE1 A:HIS9 4.6 15.2 1.0
O B:HOH101 4.6 17.3 1.0
CA A:ARG14 4.7 12.3 1.0
CD2 A:TYR13 4.7 17.7 0.5
HG3 A:ARG14 4.7 15.0 1.0
CD A:PRO10 4.7 14.0 1.0
HD2 A:TYR13 4.8 19.3 0.5
OH A:TYR5 4.8 14.7 1.0
HB2 A:GLU17 4.9 16.0 1.0
CG A:ARG14 4.9 12.5 1.0
HE1 A:HIS9 4.9 18.2 1.0
HA A:TYR13 4.9 16.3 0.5
CG A:TYR13 4.9 15.4 0.5
HA A:TYR13 5.0 16.5 0.5

Reference:

S.Mouilleron, Z.Wenxin, T.Johansen, S.Tooze, Y.P.Abudu, T.Lamark. Structure of SAMM50 Lir Bound to GABARAPL1 To Be Published.
Page generated: Mon Jul 29 17:50:29 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy