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Chlorine in PDB 6zmc: Structure of the Trna-Monooxygenase Enzyme Miae Frozen Under 2000 Bar Using the High Pressure Freezing Method

Protein crystallography data

The structure of Structure of the Trna-Monooxygenase Enzyme Miae Frozen Under 2000 Bar Using the High Pressure Freezing Method, PDB code: 6zmc was solved by P.Carpentier, M.Atta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.52 / 2.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 117.388, 51.909, 78.978, 90.00, 90.36, 90.00
R / Rfree (%) 18.2 / 24.5

Other elements in 6zmc:

The structure of Structure of the Trna-Monooxygenase Enzyme Miae Frozen Under 2000 Bar Using the High Pressure Freezing Method also contains other interesting chemical elements:

Argon (Ar) 1 atom
Iron (Fe) 4 atoms
Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Trna-Monooxygenase Enzyme Miae Frozen Under 2000 Bar Using the High Pressure Freezing Method (pdb code 6zmc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of the Trna-Monooxygenase Enzyme Miae Frozen Under 2000 Bar Using the High Pressure Freezing Method, PDB code: 6zmc:

Chlorine binding site 1 out of 1 in 6zmc

Go back to Chlorine Binding Sites List in 6zmc
Chlorine binding site 1 out of 1 in the Structure of the Trna-Monooxygenase Enzyme Miae Frozen Under 2000 Bar Using the High Pressure Freezing Method


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Trna-Monooxygenase Enzyme Miae Frozen Under 2000 Bar Using the High Pressure Freezing Method within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:74.4
occ:1.00
NH1 B:ARG67 3.1 50.5 1.0
NH2 C:ARG67 3.3 64.7 1.0
CD B:ARG67 3.9 52.7 1.0
CD C:ARG67 4.0 62.6 1.0
CB B:ARG67 4.0 52.1 1.0
CB C:ARG67 4.1 59.8 1.0
O C:HOH423 4.1 76.8 1.0
CZ B:ARG67 4.2 51.7 1.0
CG B:ARG67 4.3 52.9 1.0
CZ C:ARG67 4.4 62.8 1.0
NE B:ARG67 4.5 52.1 1.0
CG C:ARG67 4.5 61.9 1.0
CG2 C:VAL71 4.6 57.8 1.0
CG2 B:VAL71 4.7 63.0 1.0
NE C:ARG67 4.7 63.1 1.0
O C:ARG67 4.7 62.1 1.0
CA C:ARG67 5.0 60.1 1.0
CA B:ARG67 5.0 53.7 1.0

Reference:

P.Carpentier, C.Lepretre, C.Basset, T.Douki, S.Torelli, V.Duarte, D.Hamdane, M.Fontecave, M.Atta. Structural, Biochemical and Functional Analyses of Trna-Monooxygenase Enzyme Miae From Pseudomonas Putida Provide Insights Into Trna/Miae Interaction. Nucleic Acids Res. V. 48 9918 2020.
ISSN: ESSN 1362-4962
PubMed: 32785618
DOI: 10.1093/NAR/GKAA667
Page generated: Mon Jul 29 18:06:47 2024

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