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Chlorine in PDB 6zrw: Crystal Structure of the Fungal Lectin CML1

Protein crystallography data

The structure of Crystal Structure of the Fungal Lectin CML1, PDB code: 6zrw was solved by S.Bleuler-Martinez, V.Olieric, M.Sharpe, G.Capitani, M.Aebi, M.Kuenzler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 61.17 / 1.35
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 44.497, 73.626, 111.956, 90, 101.03, 90
R / Rfree (%) 14.6 / 17.6

Other elements in 6zrw:

The structure of Crystal Structure of the Fungal Lectin CML1 also contains other interesting chemical elements:

Platinum (Pt) 8 atoms
Potassium (K) 8 atoms

Chlorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 26;

Binding sites:

The binding sites of Chlorine atom in the Crystal Structure of the Fungal Lectin CML1 (pdb code 6zrw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 26 binding sites of Chlorine where determined in the Crystal Structure of the Fungal Lectin CML1, PDB code: 6zrw:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 26 in 6zrw

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Chlorine binding site 1 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:98.1
occ:1.00
CL1 A:P3C204 0.0 98.1 1.0
PT A:P3C204 2.4 222.5 1.0
NE1 A:TRP94 3.2 22.9 1.0
CE2 A:TRP94 4.2 21.8 1.0
CD1 A:TRP94 4.2 22.0 1.0
CZ2 A:TRP94 4.4 22.6 1.0
C3 A:GOL202 4.6 51.2 1.0
O A:HOH339 4.6 31.9 1.0
O B:HOH401 4.9 45.9 1.0

Chlorine binding site 2 out of 26 in 6zrw

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Chlorine binding site 2 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:130.0
occ:1.00
CL1 A:P3C205 0.0 130.0 1.0
PT A:P3C205 2.4 195.4 1.0
CL2 A:P3C205 3.4 160.4 1.0
CL3 A:P3C205 3.4 135.7 1.0
CE A:LYS19 3.5 33.1 1.0
CB A:PRO39 3.7 17.1 1.0
CG A:PRO39 3.8 18.1 1.0
NZ A:LYS19 3.9 35.1 1.0
CE A:LYS116 4.2 26.1 1.0
NZ A:LYS116 4.6 28.9 1.0
CD A:PRO39 4.7 16.4 1.0
CD A:LYS19 4.9 29.6 1.0
O A:HOH430 4.9 46.2 1.0

Chlorine binding site 3 out of 26 in 6zrw

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Chlorine binding site 3 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:160.4
occ:1.00
CL2 A:P3C205 0.0 160.4 1.0
PT A:P3C205 2.4 195.4 1.0
CE A:LYS19 3.2 33.1 1.0
O A:ALA37 3.4 15.0 1.0
CL1 A:P3C205 3.4 130.0 1.0
CD A:PRO39 3.7 16.4 1.0
CB A:ALA37 3.9 14.6 1.0
NZ A:LYS19 3.9 35.1 1.0
CG A:PRO39 4.0 18.1 1.0
C A:ALA37 4.0 15.1 1.0
CG A:LYS116 4.0 18.7 1.0
CB A:ASP115 4.2 14.2 1.0
CE A:LYS116 4.2 26.1 1.0
CD A:LYS19 4.4 29.6 1.0
CB A:PRO39 4.4 17.1 1.0
CG A:ASP115 4.4 15.4 1.0
N A:PRO39 4.4 15.6 1.0
CA A:ALA37 4.6 13.9 1.0
CD A:LYS116 4.6 22.2 1.0
OD2 A:ASP115 4.7 16.3 1.0
CG A:LYS19 4.7 25.6 1.0
N A:ILE38 4.8 15.4 1.0
N A:LYS116 4.8 15.6 1.0
CL3 A:P3C205 4.9 135.7 1.0
OD1 A:ASP115 4.9 16.9 1.0
CA A:ASP115 5.0 13.9 1.0

Chlorine binding site 4 out of 26 in 6zrw

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Chlorine binding site 4 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:135.7
occ:1.00
CL3 A:P3C205 0.0 135.7 1.0
PT A:P3C205 2.4 195.4 1.0
NZ A:LYS116 3.1 28.9 1.0
CL1 A:P3C205 3.4 130.0 1.0
CE A:LYS116 3.6 26.1 1.0
CD A:LYS116 4.6 22.2 1.0
CL2 A:P3C205 4.9 160.4 1.0

Chlorine binding site 5 out of 26 in 6zrw

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Chlorine binding site 5 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:175.5
occ:1.00
CL1 B:PC4203 0.0 175.5 1.0
PT B:PC4203 2.4 175.3 1.0
CL4 B:PC4203 3.4 175.3 1.0
CL2 B:PC4203 3.4 175.6 1.0
O B:HOH323 3.9 29.6 1.0
CE1 B:HIS5 4.3 18.0 1.0
NE2 B:HIS5 4.7 19.2 1.0
CL3 B:PC4203 4.9 175.4 1.0
O B:HOH329 4.9 47.2 1.0

Chlorine binding site 6 out of 26 in 6zrw

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Chlorine binding site 6 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:175.6
occ:1.00
CL2 B:PC4203 0.0 175.6 1.0
PT B:PC4203 2.4 175.3 1.0
CL1 B:PC4203 3.4 175.5 1.0
CL3 B:PC4203 3.4 175.4 1.0
CE1 B:HIS5 3.7 18.0 1.0
NE2 B:HIS5 4.0 19.2 1.0
CG2 A:VAL117 4.0 20.0 1.0
O A:HOH417 4.0 37.7 1.0
O B:HOH323 4.0 29.6 1.0
CZ2 B:TRP94 4.2 18.8 1.0
CG1 A:VAL117 4.2 20.6 1.0
NE1 B:TRP94 4.3 20.1 1.0
CB A:VAL117 4.5 18.7 1.0
CE2 B:TRP94 4.6 18.6 1.0
ND1 B:HIS5 4.8 17.8 1.0
CL4 B:PC4203 4.8 175.3 1.0

Chlorine binding site 7 out of 26 in 6zrw

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Chlorine binding site 7 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:175.4
occ:1.00
CL3 B:PC4203 0.0 175.4 1.0
PT B:PC4203 2.4 175.3 1.0
NE1 B:TRP94 3.3 20.1 1.0
CL4 B:PC4203 3.4 175.3 1.0
CL2 B:PC4203 3.4 175.6 1.0
CD1 B:TRP94 4.0 19.1 1.0
CE2 B:TRP94 4.3 18.6 1.0
C2 B:GOL202 4.4 56.7 1.0
C1 B:GOL202 4.5 47.1 1.0
C3 B:GOL202 4.6 38.5 1.0
CZ2 B:TRP94 4.8 18.8 1.0
CL1 B:PC4203 4.9 175.5 1.0

Chlorine binding site 8 out of 26 in 6zrw

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Chlorine binding site 8 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:175.3
occ:1.00
CL4 B:PC4203 0.0 175.3 1.0
PT B:PC4203 2.4 175.3 1.0
CL3 B:PC4203 3.4 175.4 1.0
CL1 B:PC4203 3.4 175.5 1.0
NE1 B:TRP94 4.7 20.1 1.0
CL2 B:PC4203 4.8 175.6 1.0
CD1 B:TRP94 4.9 19.1 1.0

Chlorine binding site 9 out of 26 in 6zrw

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Chlorine binding site 9 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl204

b:130.4
occ:1.00
CL1 C:P3C204 0.0 130.4 1.0
PT C:P3C204 2.4 287.1 1.0
NH2 D:ARG114 3.3 32.9 1.0
CL2 C:P3C204 3.4 162.9 1.0
CH3 C:ACT208 3.7 51.3 1.0
NE D:ARG114 3.8 28.6 1.0
CZ D:ARG114 3.8 31.5 1.0
O C:ACT206 4.3 46.0 1.0
C C:ACT208 4.4 62.0 1.0
OXT C:ACT208 4.6 52.5 1.0
CL3 C:P3C204 4.8 80.5 1.0
C C:ACT206 4.9 53.7 1.0
NH1 D:ARG114 4.9 33.5 1.0
OXT C:ACT206 5.0 83.4 1.0
CD D:ARG114 5.0 23.9 1.0
NE1 C:TRP94 5.0 23.1 1.0

Chlorine binding site 10 out of 26 in 6zrw

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Chlorine binding site 10 out of 26 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl204

b:162.9
occ:1.00
CL2 C:P3C204 0.0 162.9 1.0
PT C:P3C204 2.4 287.1 1.0
CL3 C:P3C204 3.4 80.5 1.0
CL1 C:P3C204 3.4 130.4 1.0
NE D:ARG114 3.6 28.6 1.0
CH3 C:ACT208 3.7 51.3 1.0
CD D:ARG114 3.7 23.9 1.0
CG1 D:VAL117 4.0 20.1 1.0
CZ2 C:TRP94 4.0 20.9 1.0
CG2 D:VAL117 4.1 18.4 1.0
NE1 C:TRP94 4.2 23.1 1.0
CZ D:ARG114 4.3 31.5 1.0
CE2 C:TRP94 4.5 21.5 1.0
CB D:VAL117 4.7 17.5 1.0
O C:HOH323 4.7 36.6 1.0
NH2 D:ARG114 4.7 32.9 1.0
NH1 D:ARG114 4.9 33.5 1.0

Reference:

S.Bleuler-Martinez, A.Varrot, V.Olieric, M.Schubert, T.Wohlschlager, D.Plaza, M.Waelti, Y.Duport, G.Capitani, M.Aebi, M.Kuenzler. Structure and Function of A Novel Fucose-Binding Protein From the Mushroom Coprinopsis Cinerea To Be Published.
Page generated: Sat Aug 21 13:09:40 2021

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