Atomistry » Chlorine » PDB 6zp8-6zy0 » 6zwk
Atomistry »
  Chlorine »
    PDB 6zp8-6zy0 »
      6zwk »

Chlorine in PDB 6zwk: Crystal Structure of the Phosphorylated C-Terminal Tail of Histone H2AX in Complex with A Specific Nanobody (C6 Gammaxbody)

Protein crystallography data

The structure of Crystal Structure of the Phosphorylated C-Terminal Tail of Histone H2AX in Complex with A Specific Nanobody (C6 Gammaxbody), PDB code: 6zwk was solved by A.G.Mcewen, E.Moeglin, D.Desplancq, E.Weiss, A.Poterszman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 61.49 / 1.55
Space group P 31
Cell size a, b, c (Å), α, β, γ (°) 87.412, 87.412, 105.409, 90, 90, 120
R / Rfree (%) 14.9 / 18.4

Other elements in 6zwk:

The structure of Crystal Structure of the Phosphorylated C-Terminal Tail of Histone H2AX in Complex with A Specific Nanobody (C6 Gammaxbody) also contains other interesting chemical elements:

Sodium (Na) 7 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Phosphorylated C-Terminal Tail of Histone H2AX in Complex with A Specific Nanobody (C6 Gammaxbody) (pdb code 6zwk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Phosphorylated C-Terminal Tail of Histone H2AX in Complex with A Specific Nanobody (C6 Gammaxbody), PDB code: 6zwk:

Chlorine binding site 1 out of 1 in 6zwk

Go back to Chlorine Binding Sites List in 6zwk
Chlorine binding site 1 out of 1 in the Crystal Structure of the Phosphorylated C-Terminal Tail of Histone H2AX in Complex with A Specific Nanobody (C6 Gammaxbody)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Phosphorylated C-Terminal Tail of Histone H2AX in Complex with A Specific Nanobody (C6 Gammaxbody) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl202

b:47.8
occ:1.00
HH12 D:ARG19 2.4 36.4 0.7
O D:HOH371 3.1 25.4 1.0
HH22 D:ARG19 3.2 37.5 0.7
NH1 D:ARG19 3.2 30.3 0.7
HG22 D:THR68 3.6 25.7 1.0
OE1 D:GLN81 3.7 30.5 1.0
HH11 D:ARG19 3.8 36.4 0.7
HG21 D:THR68 3.9 25.7 1.0
NH2 D:ARG19 3.9 31.3 0.7
CZ D:ARG19 4.0 30.7 0.7
HB2 D:GLN81 4.1 28.3 1.0
HB3 D:SER70 4.1 24.6 1.0
OG D:SER70 4.2 21.1 1.0
CG2 D:THR68 4.2 21.4 1.0
HB D:THR68 4.2 25.1 1.0
CD D:GLN81 4.2 28.6 1.0
HE22 D:GLN81 4.3 34.9 1.0
NE2 D:GLN81 4.5 29.1 1.0
HB3 D:GLN81 4.5 28.3 1.0
CB D:SER70 4.6 20.5 1.0
HH21 D:ARG19 4.7 37.5 0.7
CB D:GLN81 4.7 23.6 1.0
CB D:THR68 4.8 20.9 1.0
HG D:SER70 4.9 25.3 1.0
HG23 D:THR68 5.0 25.7 1.0

Reference:

E.Moeglin, D.Desplancq, A.Stoessel, C.Massute, J.Ranniger, A.G.Mcewen, G.Zeder-Lutz, M.Oulad-Abdelghani, M.Chiper, P.Lafaye, P.Didier, A.Poterszman, E.Weiss. A Novel Nanobody Precisely Visualizes Phosphorylated Histone H2AX in Living Cancer Cells Under Drug-Induced Replication Stress Cancers (Basel) V. 13 2021.
ISSN: ESSN 2072-6694
DOI: 10.3390/CANCERS13133317
Page generated: Mon Jul 29 18:14:34 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy