Chlorine in PDB 7a59: Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form)

The structure of Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form), PDB code: 7a59 was solved by J.Hellert, P.Guardado-Calvo, F.A.Rey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.91 / 2.20
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	69.961, 216.083, 274.283, 90, 90, 90
R / Rfree (%)	16.1 / 19.4

The binding sites of Chlorine atom in the Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form) (pdb code 7a59). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form), PDB code: 7a59:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in the Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1602 b:46.0 occ:1.00 O A:HOH1921 3.0 46.6 1.0 N A:ASN1269 3.3 48.3 1.0 N C:ASN1269 3.4 47.7 1.0 N B:ASN1269 3.4 48.0 1.0 CA C:ASN1269 3.6 42.5 1.0 CA A:ASN1269 3.6 52.6 1.0 CA B:ASN1269 3.7 46.9 1.0 CB C:ASN1269 3.9 46.7 1.0 CB A:ASN1269 4.0 52.8 1.0 CB A:ARG1268 4.0 48.6 1.0 CB B:ASN1269 4.0 45.9 1.0 CB B:ARG1268 4.0 47.1 1.0 CD A:ARG1268 4.1 52.3 1.0 CB C:ARG1268 4.1 49.6 1.0 CD B:ARG1268 4.2 40.9 1.0 CD C:ARG1268 4.3 46.8 1.0 C A:ARG1268 4.3 51.2 1.0 OD1 C:ASN1269 4.4 45.2 1.0 OD1 A:ASN1269 4.4 53.2 1.0 CG A:ARG1268 4.4 47.1 1.0 C B:ARG1268 4.4 50.6 1.0 CG B:ARG1268 4.4 44.9 1.0 C C:ARG1268 4.4 48.6 1.0 OD1 B:ASN1269 4.5 46.8 1.0 CG C:ASN1269 4.5 47.2 1.0 CG A:ASN1269 4.6 53.5 1.0 CG C:ARG1268 4.6 49.6 1.0 O A:HOH1776 4.6 49.9 1.0 CG B:ASN1269 4.6 49.8 1.0 CA A:ARG1268 4.6 50.9 1.0 O B:HOH1779 4.7 45.8 1.0 CA B:ARG1268 4.7 49.5 1.0 O C:HOH1825 4.7 47.4 1.0 CA C:ARG1268 4.8 50.5 1.0

Chlorine binding site 2 out of 6 in the Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1603 b:49.5 occ:1.00 N C:GLY1353 3.1 49.2 1.0 N A:GLY1353 3.2 47.5 1.0 N B:GLY1353 3.2 50.3 1.0 CA C:GLY1353 3.9 47.8 1.0 CA C:ASP1352 3.9 46.0 1.0 C C:ASP1352 4.0 45.9 1.0 CA A:ASP1352 4.0 45.2 1.0 CA A:GLY1353 4.0 48.5 1.0 CA B:ASP1352 4.0 47.6 1.0 C A:ASP1352 4.1 52.6 1.0 CA B:GLY1353 4.1 50.5 1.0 C B:ASP1352 4.1 47.2 1.0 CB C:ASP1352 4.4 46.3 1.0 CB B:ASP1352 4.4 43.4 1.0 CB A:ASP1352 4.5 44.5 1.0 OD1 A:ASP1352 4.6 45.8 1.0 CG A:ASP1352 4.6 52.9 1.0 CG C:ASP1352 4.6 48.8 1.0 CG B:ASP1352 4.6 52.4 1.0 OD1 C:ASP1352 4.7 47.0 1.0 O A:HOH1797 4.7 52.0 1.0 OD1 B:ASP1352 4.8 50.1 1.0 C C:GLY1353 4.8 49.9 1.0 O C:HOH1918 4.9 68.6 1.0 C A:GLY1353 4.9 48.9 1.0 C B:GLY1353 5.0 47.1 1.0 O A:TRP1351 5.0 46.1 1.0

Chlorine binding site 3 out of 6 in the Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1604 b:84.8 occ:1.00 NH2 B:ARG1105 3.8 78.6 1.0 N A:THR1437 3.8 77.9 1.0 OE2 B:GLU1429 4.0 93.6 1.0 CD2 A:HIS1436 4.1 84.7 1.0 CA A:HIS1436 4.1 80.9 1.0 CB A:HIS1436 4.2 78.2 1.0 C A:HIS1436 4.5 81.5 1.0 OE1 B:GLU1429 4.5 100.1 1.0 CG A:HIS1436 4.5 84.0 1.0 CB A:THR1437 4.5 72.8 1.0 O A:SER1089 4.6 75.5 1.0 OG1 A:THR1437 4.6 74.4 1.0 CD B:GLU1429 4.6 93.5 1.0 CB A:SER1089 4.7 71.0 1.0 O A:THR1437 4.7 84.9 1.0 CA A:THR1437 4.7 76.5 1.0 O B:HOH1845 4.8 84.8 1.0 CZ B:ARG1105 4.9 80.6 1.0

Chlorine binding site 4 out of 6 in the Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form) within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1602 b:94.3 occ:1.00 N B:LYS1400 3.3 53.9 1.0 CG B:ARG1401 3.3 72.6 1.0 CA B:SER1399 3.8 57.5 1.0 N B:ARG1401 3.9 59.9 1.0 C B:LYS1400 4.0 58.0 1.0 C B:SER1399 4.0 54.5 1.0 O B:HIS1398 4.1 54.8 1.0 CG B:LYS1400 4.2 50.1 1.0 CA B:LYS1400 4.2 53.7 1.0 CD B:ARG1401 4.3 83.0 1.0 CA B:ARG1401 4.3 60.5 1.0 CB B:ARG1401 4.4 59.6 1.0 O B:HOH1864 4.4 68.8 1.0 OG B:SER1399 4.4 61.3 1.0 O B:LYS1400 4.5 59.7 1.0 CB B:SER1399 4.6 56.4 1.0 NH2 B:ARG1401 4.6 88.2 1.0 N B:SER1399 4.6 60.5 1.0 C B:HIS1398 4.7 55.0 1.0 CB B:LYS1400 4.8 54.1 1.0

Chlorine binding site 5 out of 6 in the Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form) within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1601 b:94.5 occ:1.00 O A:HOH1744 3.3 68.2 1.0 N C:THR1437 3.4 75.1 1.0 CA C:HIS1436 3.9 72.4 1.0 ND1 C:HIS1436 4.0 80.0 1.0 CB C:HIS1436 4.0 72.3 1.0 C C:HIS1436 4.1 77.7 1.0 CB C:THR1437 4.2 71.6 1.0 NH2 A:ARG1105 4.2 97.9 1.0 CB C:SER1089 4.3 61.7 1.0 O C:SER1089 4.3 74.7 1.0 OG1 C:THR1437 4.3 65.8 1.0 CA C:THR1437 4.3 72.6 1.0 CG C:HIS1436 4.5 77.1 1.0 O C:THR1437 4.5 82.5 1.0 OE2 A:GLU1094 4.8 132.4 1.0 OE2 A:GLU1429 4.8 99.1 1.0 C C:SER1089 4.8 68.0 1.0 O C:LEU1435 4.9 83.4 1.0 C C:THR1437 4.9 77.5 1.0 CA C:SER1089 4.9 66.3 1.0 OG C:SER1089 5.0 59.0 1.0 OE1 A:GLU1429 5.0 101.8 1.0

Chlorine binding site 6 out of 6 in the Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form) within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1602 b:90.6 occ:1.00 N C:GLN1546 3.4 50.5 1.0 O C:HOH1889 3.4 72.3 1.0 O C:HOH1723 3.6 59.8 1.0 CG C:GLN1546 3.7 59.4 1.0 CA C:GLU1545 3.9 56.6 1.0 CB C:GLN1546 4.0 51.5 1.0 CB C:GLU1545 4.1 61.6 1.0 C C:GLU1545 4.2 49.4 1.0 CD C:GLN1546 4.3 69.0 1.0 CA C:GLN1546 4.3 53.6 1.0 CG C:GLU1545 4.4 69.5 1.0 OE1 C:GLN1546 4.7 73.4 1.0 NE2 C:GLN1546 4.9 55.2 1.0 O C:GLN1546 4.9 52.1 1.0

A.K.Mishra, J.Hellert, N.Freitas, A.Haouz, F.L.Cosset, P.Guardado-Calvo, J.S.Mclellan, F.A.Rey. Antibodies Protecting Against the Crimean-Congo Hemorrhagic Fever Virus Block the Membrane Fusogenic Conformational Change of Glycoprotein Gc To Be Published.