Atomistry » Chlorine » PDB 7b1n-7ba7 » 7b1s
Atomistry »
  Chlorine »
    PDB 7b1n-7ba7 »
      7b1s »

Chlorine in PDB 7b1s: Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution

Enzymatic activity of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution

All present enzymatic activity of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution:
2.8.4.1;

Protein crystallography data

The structure of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution, PDB code: 7b1s was solved by T.Wagner, O.N.Lemaire, S.Engilberge, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.76 / 0.99
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 83.736, 146.927, 113.128, 90, 106.98, 90
R / Rfree (%) 11.2 / 12.8

Other elements in 7b1s:

The structure of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution also contains other interesting chemical elements:

Potassium (K) 4 atoms
Manganese (Mn) 1 atom
Nickel (Ni) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution (pdb code 7b1s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution, PDB code: 7b1s:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 7b1s

Go back to Chlorine Binding Sites List in 7b1s
Chlorine binding site 1 out of 6 in the Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:11.6
occ:1.00
 OG B:SER324 3.1 9.3 1.0
O B:HOH1215 3.1 15.0 1.0
O B:HOH1012 3.2 16.2 1.0
O B:HOH821 3.2 7.9 1.0
O B:HOH1067 3.4 13.6 1.0
NH1 B:ARG259 3.6 10.0 1.0
CB B:SER324 3.7 8.7 1.0
CD B:ARG259 3.8 9.1 1.0
CB B:ARG259 4.1 7.2 1.0
CG B:ARG259 4.2 8.1 1.0
CZ B:ARG259 4.6 10.1 1.0
O C:HOH1474 4.6 31.7 1.0
NE B:ARG259 4.7 9.7 1.0
O B:ARG256 4.8 7.8 1.0
N B:TRP260 4.8 6.3 1.0
CA B:SER324 5.0 8.1 1.0

Chlorine binding site 2 out of 6 in 7b1s

Go back to Chlorine Binding Sites List in 7b1s
Chlorine binding site 2 out of 6 in the Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:8.4
occ:0.71
 O B:HOH1208 3.0 26.6 0.7
O B:HOH1102 3.0 14.9 1.0
O B:HOH898 3.1 13.3 1.0
N B:PHE194 3.1 4.5 1.0
O B:HOH1232 3.2 9.5 0.7
O B:HOH1007 3.3 7.8 1.0
O B:HOH1119 3.7 29.2 0.6
CA B:GLU193 3.7 4.2 1.0
C B:GLU193 3.9 4.3 1.0
CB B:GLU193 3.9 4.9 1.0
CB B:PHE194 4.0 4.7 1.0
CD2 B:LEU155 4.0 8.5 1.0
CA B:PHE194 4.1 4.7 1.0
CB B:ALA205 4.2 7.6 1.0
CG B:PHE194 4.4 4.8 1.0
O B:HOH1040 4.6 14.8 1.0
CA B:ALA205 4.6 6.4 1.0
CG B:GLU193 4.6 5.7 1.0
O B:HOH1060 4.6 6.4 1.0
C B:PHE194 4.7 4.7 1.0
O B:HOH922 4.7 6.4 1.0
CD1 B:PHE194 4.7 4.8 1.0
N B:ALA205 4.8 6.1 1.0
O B:PHE194 4.9 5.6 1.0
CD1 B:LEU155 4.9 8.8 1.0
O B:HOH701 5.0 7.4 0.6
N B:GLU193 5.0 4.3 1.0

Chlorine binding site 3 out of 6 in 7b1s

Go back to Chlorine Binding Sites List in 7b1s
Chlorine binding site 3 out of 6 in the Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl303

b:31.6
occ:1.00
 O C:HOH1547 2.6 40.0 1.0
N C:GLY49 3.1 15.9 1.0
NH1 C:ARG46 3.2 14.9 1.0
CD1 C:LEU48 3.7 15.6 1.0
NH2 C:ARG46 3.7 14.8 1.0
CA C:GLY49 3.8 16.8 1.0
CZ C:ARG46 3.9 14.9 1.0
CA C:LEU48 4.1 13.2 1.0
C C:LEU48 4.1 15.1 1.0
O C:HOH1571 4.4 39.2 1.0
CD1 C:LEU40 4.5 11.4 1.0
CG C:LEU48 4.5 14.3 1.0
C C:GLY49 4.6 17.2 1.0
N C:GLU50 4.8 17.2 0.5
N C:GLU50 4.8 16.7 0.5
CB C:LEU48 4.8 13.4 1.0
O C:HIS47 4.8 12.3 1.0
O C:GLU50 5.0 17.3 0.5
O C:GLU50 5.0 17.7 0.5

Chlorine binding site 4 out of 6 in 7b1s

Go back to Chlorine Binding Sites List in 7b1s
Chlorine binding site 4 out of 6 in the Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl503

b:10.4
occ:1.00
 OG E:SER324 3.1 7.8 1.0
O E:HOH925 3.2 14.5 1.0
O E:HOH1111 3.2 14.3 1.0
O E:HOH733 3.2 7.4 1.0
O E:HOH993 3.4 13.4 0.9
NH1 E:ARG259 3.5 8.9 1.0
CB E:SER324 3.7 7.3 1.0
CD E:ARG259 3.8 7.8 1.0
O E:HOH814 3.9 24.3 0.7
CB E:ARG259 4.1 6.1 1.0
CG E:ARG259 4.2 7.1 1.0
CZ E:ARG259 4.5 8.1 1.0
NE E:ARG259 4.6 8.3 1.0
O F:HOH702 4.7 30.5 1.0
O E:ARG256 4.8 7.3 1.0
N E:TRP260 4.8 4.9 1.0
O E:HOH1140 4.9 36.5 1.0

Chlorine binding site 5 out of 6 in 7b1s

Go back to Chlorine Binding Sites List in 7b1s
Chlorine binding site 5 out of 6 in the Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl504

b:8.8
occ:0.68
 O E:HOH811 3.0 12.2 1.0
N E:PHE194 3.1 4.7 1.0
O E:HOH1003 3.2 14.8 1.0
O E:HOH1127 3.3 10.5 0.7
O E:HOH888 3.3 7.4 1.0
CA E:GLU193 3.6 4.5 1.0
O E:HOH1027 3.7 36.9 0.3
C E:GLU193 3.9 4.8 1.0
CB E:GLU193 3.9 5.5 1.0
CB E:PHE194 4.0 5.0 1.0
CA E:PHE194 4.0 4.9 1.0
CD2 E:LEU155 4.1 8.0 1.0
CB E:ALA205 4.2 7.7 1.0
CG E:PHE194 4.4 4.8 1.0
O E:HOH910 4.5 10.4 0.7
CG E:GLU193 4.6 5.7 1.0
C E:PHE194 4.6 4.8 1.0
CA E:ALA205 4.6 6.1 1.0
O E:HOH958 4.6 6.2 1.0
CD1 E:PHE194 4.7 4.7 1.0
O E:HOH835 4.7 6.4 1.0
O E:PHE194 4.8 5.5 1.0
N E:ALA205 4.9 6.0 1.0
CD1 E:LEU155 4.9 8.2 1.0
N E:GLU193 5.0 4.6 1.0
O E:HOH601 5.0 6.7 0.6

Chlorine binding site 6 out of 6 in 7b1s

Go back to Chlorine Binding Sites List in 7b1s
Chlorine binding site 6 out of 6 in the Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl402

b:31.7
occ:1.00
 O F:HOH760 3.0 39.0 1.0
NH1 F:ARG46 3.1 13.4 1.0
N F:GLY49 3.1 15.2 1.0
NH2 F:ARG46 3.6 13.7 1.0
CD1 F:LEU48 3.7 16.0 1.0
CZ F:ARG46 3.8 13.5 1.0
CA F:GLY49 3.9 16.2 1.0
CA F:LEU48 4.1 12.6 1.0
C F:LEU48 4.1 13.9 1.0
CD1 F:LEU40 4.3 10.7 1.0
CG F:LEU48 4.5 14.7 1.0
C F:GLY49 4.6 16.3 1.0
N F:GLU50 4.8 15.6 0.5
N F:GLU50 4.8 15.2 0.5
O F:HIS47 4.8 11.8 1.0
CB F:LEU48 4.9 13.5 1.0
O F:GLU50 5.0 16.3 0.5
O F:GLU50 5.0 16.6 0.5

Reference:

C.J.Hahn, O.N.Lemaire, J.Kahnt, S.Engilberge, G.Wegener, T.Wagner. Crystal Structure of A Key Enzyme For Anaerobic Ethane Activation. Science V. 373 118 2021.
ISSN: ESSN 1095-9203
PubMed: 34210888
DOI: 10.1126/SCIENCE.ABG1765
Page generated: Mon Jul 29 18:57:55 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy