Chlorine in PDB 7b5v: The Carbohydrate Binding Module Family 48 (CBM48) and Carboxy-Terminal Carbohydrate Esterase Family 1 (CE1) Domains of the Multidomain Esterase DMCE1B From Dysgonomonas Mossii

Protein crystallography data

The structure of The Carbohydrate Binding Module Family 48 (CBM48) and Carboxy-Terminal Carbohydrate Esterase Family 1 (CE1) Domains of the Multidomain Esterase DMCE1B From Dysgonomonas Mossii, PDB code: 7b5v was solved by S.Mazurkewich, C.Kmezik, G.Branden, J.Larsbrink, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.08 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 103.962, 80.966, 107.35, 90, 105.67, 90
R / Rfree (%) 16.8 / 21.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Carbohydrate Binding Module Family 48 (CBM48) and Carboxy-Terminal Carbohydrate Esterase Family 1 (CE1) Domains of the Multidomain Esterase DMCE1B From Dysgonomonas Mossii (pdb code 7b5v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Carbohydrate Binding Module Family 48 (CBM48) and Carboxy-Terminal Carbohydrate Esterase Family 1 (CE1) Domains of the Multidomain Esterase DMCE1B From Dysgonomonas Mossii, PDB code: 7b5v:

Chlorine binding site 1 out of 1 in 7b5v

Go back to Chlorine Binding Sites List in 7b5v
Chlorine binding site 1 out of 1 in the The Carbohydrate Binding Module Family 48 (CBM48) and Carboxy-Terminal Carbohydrate Esterase Family 1 (CE1) Domains of the Multidomain Esterase DMCE1B From Dysgonomonas Mossii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Carbohydrate Binding Module Family 48 (CBM48) and Carboxy-Terminal Carbohydrate Esterase Family 1 (CE1) Domains of the Multidomain Esterase DMCE1B From Dysgonomonas Mossii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl701

b:35.1
occ:0.85
OG A:SER542 2.8 31.1 1.0
N A:GLY450 3.1 24.9 1.0
O A:HOH997 3.1 39.5 1.0
N A:MET543 3.2 25.4 1.0
CB A:MET543 3.4 25.6 1.0
CB A:SER542 3.4 29.9 1.0
CA A:GLY450 3.5 24.9 1.0
CA A:MET543 3.8 26.2 1.0
O A:HOH964 3.9 34.0 1.0
C A:SER542 4.2 26.0 1.0
C A:GLY449 4.2 24.6 1.0
CA A:SER542 4.4 28.1 1.0
CE1 A:PHE506 4.5 52.0 1.0
CA A:GLY449 4.5 23.9 1.0
C A:GLY450 4.5 24.1 0.8
O A:GLY450 4.6 25.5 1.0
CG A:MET543 4.8 27.1 1.0
NE2 A:HIS638 5.0 26.6 0.9

Reference:

C.Kmezik, S.Mazurkewich, T.Meents, L.S.Mckee, A.Idstrom, M.Armeni, O.Savolainen, G.Branden, J.Larsbrink. A Polysaccharide Utilization Locus From the Gut Bacterium Dysgonomonas Mossii Encodes Functionally Distinct Carbohydrate Esterases J.Biol.Chem. 2021.
ISSN: ESSN 1083-351X
DOI: 10.1016/J.JBC.2021.100500
Page generated: Sat Apr 3 14:26:33 2021

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