Chlorine in PDB 7bb2: Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1))

Enzymatic activity of Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1))

All present enzymatic activity of Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1)):
2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13;

Protein crystallography data

The structure of Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1)), PDB code: 7bb2 was solved by E.Costanzi, N.Demitri, B.Giabbai, P.Storici, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.96 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.517, 100.028, 103.753, 90, 90, 90
R / Rfree (%) 16.4 / 18.9

Other elements in 7bb2:

The structure of Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1)) also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1)) (pdb code 7bb2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1)), PDB code: 7bb2:

Chlorine binding site 1 out of 1 in 7bb2

Go back to Chlorine Binding Sites List in 7bb2
Chlorine binding site 1 out of 1 in the Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1))


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1)) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl410

b:22.8
occ:1.00
 H A:GLN107 2.4 24.2 1.0
HE21 A:GLN110 2.5 25.5 1.0
HA A:ILE106 3.0 24.9 1.0
O A:HOH775 3.1 34.2 1.0
HB2 A:GLN110 3.1 19.6 1.0
N A:GLN107 3.2 20.2 1.0
HG2 A:GLN110 3.3 19.9 1.0
NE2 A:GLN110 3.3 21.3 1.0
HB A:ILE106 3.3 20.6 1.0
HB2 A:GLN107 3.3 27.9 1.0
HG22 A:ILE106 3.6 25.0 1.0
HG2 A:GLN107 3.6 31.5 1.0
CA A:ILE106 3.7 20.7 1.0
HE22 A:GLN110 3.8 25.5 1.0
CB A:GLN110 3.9 16.3 1.0
CG A:GLN110 3.9 16.6 1.0
CB A:ILE106 3.9 17.2 1.0
C A:ILE106 4.0 21.8 1.0
CB A:GLN107 4.0 23.3 1.0
CD A:GLN110 4.1 19.4 1.0
HB3 A:GLN110 4.1 19.6 1.0
CA A:GLN107 4.2 23.8 1.0
CG2 A:ILE106 4.2 20.9 1.0
CG A:GLN107 4.2 26.2 1.0
O A:HOH588 4.4 37.1 1.0
O A:GLN107 4.5 19.1 1.0
HG3 A:GLN107 4.6 31.5 1.0
HG21 A:ILE106 4.6 25.0 1.0
HG3 A:GLN110 4.8 19.9 1.0
O A:ARG105 4.8 26.8 1.0
C A:GLN107 4.8 22.0 1.0
HB3 A:GLN107 4.9 27.9 1.0
HG23 A:ILE106 5.0 25.0 1.0
HA A:GLN107 5.0 28.6 1.0
N A:ILE106 5.0 19.9 1.0

Reference:

E.Costanzi, N.Demitri, B.Giabbai, P.Storici. Crystal Structure of the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 at 1.6A Resolution (Spacegroup P2(1)2(1)2(1)) To Be Published.
Page generated: Sat Apr 3 14:26:43 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy