Chlorine in PDB 7bgc: Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor

Enzymatic activity of Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor

All present enzymatic activity of Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor:
3.1.1.8;

Protein crystallography data

The structure of Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor, PDB code: 7bgc was solved by F.Nachon, A.Salerno, M.L.Bolognesi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.80 / 2.40
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 154.4, 154.4, 128.27, 90, 90, 90
R / Rfree (%) 20.3 / 24.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor (pdb code 7bgc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor, PDB code: 7bgc:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 7bgc

Go back to Chlorine Binding Sites List in 7bgc
Chlorine binding site 1 out of 3 in the Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl607

b:99.8
occ:1.00
OE1 A:GLN351 3.4 104.1 1.0
NE A:ARG347 3.6 110.1 1.0
NH1 A:ARG347 3.8 107.9 1.0
CZ A:ARG347 4.2 105.5 1.0
CD A:GLN351 4.3 93.2 1.0
NE2 A:GLN351 4.5 89.9 1.0
CD A:ARG347 4.6 108.1 1.0

Chlorine binding site 2 out of 3 in 7bgc

Go back to Chlorine Binding Sites List in 7bgc
Chlorine binding site 2 out of 3 in the Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl608

b:127.3
occ:1.00
OH A:TYR385 2.8 102.5 1.0
CZ A:TYR385 4.0 100.1 1.0
CD A:ARG347 4.2 108.1 1.0
CE2 A:TYR385 4.3 99.8 1.0
CB A:ARG347 4.6 93.1 1.0
CG A:ARG347 4.9 98.8 1.0
NH2 A:ARG347 4.9 97.2 1.0

Chlorine binding site 3 out of 3 in 7bgc

Go back to Chlorine Binding Sites List in 7bgc
Chlorine binding site 3 out of 3 in the Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Human Butyrylcholinesterase in Complex with A Tacrine-Methylanacardate Hybrid Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl609

b:119.8
occ:1.00
NE2 A:HIS372 2.9 61.0 0.5
CD2 A:HIS372 3.6 63.0 0.5
CE1 A:HIS372 3.7 63.5 0.5
CE1 A:HIS372 4.2 56.8 0.5
ND1 A:HIS372 4.3 64.6 0.5
CA A:PHE521 4.4 76.9 1.0
CB A:PHE525 4.4 107.9 1.0
CD2 A:PHE525 4.5 110.5 1.0
CB A:PHE521 4.5 73.9 1.0
CD1 A:PHE521 4.5 77.2 1.0
CG A:HIS372 4.6 68.0 0.5
ND1 A:HIS372 4.6 61.2 0.5
N A:PHE521 4.7 76.2 1.0
CG A:PHE525 4.8 110.1 1.0

Reference:

M.Rossi, M.Freschi, L.De Camargo Nascente, A.Salerno, S.De Melo Viana Teixeira, F.Nachon, F.Chantegreil, O.Soukup, L.Prchal, M.Malaguti, C.Bergamini, M.Bartolini, C.Angeloni, S.Hrelia, L.A.Soares Romeiro, M.L.Bolognesi. Sustainable Drug Discovery of Multi-Target-Directed Ligands For Alzheimer'S Disease. J.Med.Chem. 2021.
ISSN: ISSN 0022-2623
PubMed: 33829779
DOI: 10.1021/ACS.JMEDCHEM.1C00048
Page generated: Sat Jul 10 12:33:46 2021

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