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Chlorine in PDB 7bvu: Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-

Protein crystallography data

The structure of Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-, PDB code: 7bvu was solved by S.Batra, B.Prakash, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.83 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.619, 72.402, 157.957, 90, 90, 90
R / Rfree (%) 19.1 / 22.9

Other elements in 7bvu:

The structure of Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- also contains other interesting chemical elements:

Aluminium (Al) 2 atoms
Fluorine (F) 8 atoms
Potassium (K) 2 atoms
Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- (pdb code 7bvu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-, PDB code: 7bvu:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7bvu

Go back to Chlorine Binding Sites List in 7bvu
Chlorine binding site 1 out of 2 in the Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl306

b:36.6
occ:1.00
N A:TYR58 3.1 28.2 1.0
N A:TYR63 3.3 41.5 0.9
N A:SER59 3.6 32.7 1.0
CB A:TYR58 3.6 29.3 1.0
CA A:PRO62 3.7 37.1 1.0
CB A:ALA67 3.7 28.6 1.0
CA A:TYR58 3.7 31.2 1.0
O A:SER59 4.0 31.9 1.0
CG1 A:ILE57 4.0 30.1 1.0
CG A:TYR63 4.0 35.7 0.9
C A:PRO62 4.0 42.7 1.0
CB A:TYR63 4.1 36.7 0.9
C A:ILE57 4.1 27.0 1.0
C A:TYR58 4.1 30.8 1.0
CA A:ILE57 4.1 25.6 1.0
CB A:PRO62 4.2 36.4 1.0
CD2 A:TYR58 4.2 32.5 1.0
CA A:TYR63 4.2 41.6 0.9
CG A:TYR58 4.4 32.0 1.0
CA A:SER59 4.5 32.2 1.0
OG A:SER64 4.6 42.2 1.0
CB A:ILE57 4.7 28.2 1.0
C A:SER59 4.7 31.5 1.0
CB A:SER59 4.8 27.5 1.0
N A:SER64 4.9 44.5 1.0
N A:PRO62 4.9 32.2 1.0
C A:TYR63 5.0 40.8 0.9

Chlorine binding site 2 out of 2 in 7bvu

Go back to Chlorine Binding Sites List in 7bvu
Chlorine binding site 2 out of 2 in the Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4-


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl306

b:33.8
occ:1.00
N B:TYR58 3.1 26.3 1.0
O B:HOH416 3.2 33.4 1.0
N B:TYR63 3.3 41.4 1.0
CD2 B:TYR63 3.4 47.5 1.0
N B:SER59 3.5 28.8 1.0
CB B:TYR58 3.5 28.4 1.0
CA B:TYR58 3.7 30.5 1.0
CB B:ALA67 3.7 24.7 1.0
CA B:PRO62 3.8 36.0 1.0
C B:TYR58 4.0 32.3 1.0
CB B:TYR63 4.0 39.2 1.0
O B:SER59 4.1 30.3 1.0
C B:PRO62 4.1 41.3 1.0
C B:ILE57 4.1 26.9 1.0
CG1 B:ILE57 4.1 25.3 1.0
CG B:TYR63 4.1 43.4 1.0
CD2 B:TYR58 4.2 24.5 1.0
CA B:ILE57 4.2 22.0 1.0
CE2 B:TYR63 4.3 49.3 1.0
CA B:TYR63 4.3 43.0 1.0
CB B:PRO62 4.3 34.6 1.0
CG B:TYR58 4.3 31.5 1.0
CA B:SER59 4.5 30.4 1.0
CB B:SER59 4.6 36.6 1.0
C B:SER59 4.7 29.6 1.0
CB B:ILE57 4.8 24.2 1.0
N B:SER64 5.0 42.5 1.0
N B:PRO62 5.0 35.3 1.0

Reference:

S.Batra, B.Prakash. Crystal Structure of S. Thermophilus Nfeob E66A.E67A Bound to Gdp.ALF4- To Be Published.
Page generated: Mon Jul 29 19:23:00 2024

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