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Chlorine in PDB 7bwv: Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-

Protein crystallography data

The structure of Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-, PDB code: 7bwv was solved by S.Batra, B.Prakash, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.63 / 2.35
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.699, 73.614, 156.754, 90, 90, 90
R / Rfree (%) 19.3 / 23.2

Other elements in 7bwv:

The structure of Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- also contains other interesting chemical elements:

Aluminium (Al) 2 atoms
Fluorine (F) 8 atoms
Potassium (K) 2 atoms
Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- (pdb code 7bwv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-, PDB code: 7bwv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7bwv

Go back to Chlorine Binding Sites List in 7bwv
Chlorine binding site 1 out of 2 in the Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:39.4
occ:1.00
O A:HOH438 2.9 39.8 1.0
N A:TYR58 3.1 27.0 1.0
N A:TYR63 3.3 36.7 1.0
CB A:ALA67 3.5 36.9 1.0
N A:SER59 3.6 35.9 1.0
CD2 A:TYR63 3.7 51.7 1.0
CA A:PRO62 3.7 43.8 1.0
CB A:TYR58 3.7 31.4 1.0
CA A:TYR58 3.8 33.2 1.0
CB A:PRO62 3.9 37.2 1.0
CG1 A:ILE57 4.0 30.0 1.0
O A:SER59 4.0 35.2 1.0
C A:PRO62 4.1 39.1 1.0
C A:ILE57 4.1 32.1 1.0
CA A:ILE57 4.1 26.3 1.0
CD2 A:TYR58 4.1 37.9 1.0
CB A:TYR63 4.2 45.4 1.0
C A:TYR58 4.2 37.3 1.0
CA A:TYR63 4.3 39.7 1.0
CG A:TYR63 4.3 56.4 1.0
CG A:TYR58 4.4 33.1 1.0
CE2 A:TYR63 4.5 58.4 1.0
CA A:SER59 4.6 33.6 1.0
CB A:ILE57 4.6 28.0 1.0
N A:SER64 4.7 49.2 1.0
CB A:SER59 4.7 36.6 1.0
C A:SER59 4.8 28.5 1.0
C A:TYR63 4.9 47.3 1.0
N A:PRO62 5.0 38.0 1.0

Chlorine binding site 2 out of 2 in 7bwv

Go back to Chlorine Binding Sites List in 7bwv
Chlorine binding site 2 out of 2 in the Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4-


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl305

b:37.8
occ:1.00
O B:HOH455 2.9 41.2 1.0
N B:TYR58 3.1 28.1 1.0
N B:TYR63 3.4 39.5 1.0
CD2 B:TYR63 3.5 42.7 1.0
CB B:ALA67 3.6 25.1 1.0
CB B:TYR58 3.6 24.4 1.0
N B:SER59 3.7 32.4 1.0
CA B:TYR58 3.8 28.9 1.0
CA B:PRO62 3.8 42.2 1.0
CD2 B:TYR58 4.0 29.3 1.0
CB B:PRO62 4.1 29.9 1.0
C B:PRO62 4.1 42.2 1.0
CG B:TYR63 4.1 49.0 1.0
C B:ILE57 4.1 24.4 1.0
CB B:TYR63 4.1 39.0 1.0
C B:TYR58 4.2 31.6 1.0
CG1 B:ILE57 4.2 33.1 1.0
CA B:ILE57 4.2 23.9 1.0
O B:SER59 4.2 34.4 1.0
CE2 B:TYR63 4.2 50.7 1.0
CG B:TYR58 4.3 28.7 1.0
CA B:TYR63 4.3 43.1 1.0
CA B:SER59 4.7 32.8 1.0
N B:SER64 4.8 37.7 1.0
CB B:SER59 4.8 40.5 1.0
CB B:ILE57 4.8 29.6 1.0
C B:SER59 4.9 37.5 1.0
C B:TYR63 5.0 46.1 1.0

Reference:

S.Batra, B.Prakash. Crystal Structure of S. Thermophilus Nfeob E67A Bound to Gdp.ALF4- To Be Published.
Page generated: Mon Jul 29 19:23:01 2024

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