Chlorine in PDB 7c4u: Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution

The binding sites of Chlorine atom in the Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution (pdb code 7c4u). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution, PDB code: 7c4u:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in the Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl2 b:16.5 occ:1.00 CL A:OMZ2 0.0 16.5 1.0 CE1 A:OMZ2 1.7 8.8 1.0 CZ A:OMZ2 2.7 8.0 1.0 CD1 A:OMZ2 2.7 8.2 1.0 OH A:OMZ2 2.9 8.2 1.0 O B:HOH221 3.0 26.2 1.0 C5 A:GHP4 3.3 7.6 1.0 CD2 B:OMY6 3.4 8.0 1.0 C6 A:GHP4 3.6 7.7 1.0 CE2 B:OMY6 3.6 9.6 1.0 O6 C:BGC1 3.9 13.3 1.0 CG A:OMZ2 3.9 8.4 1.0 CE2 A:OMZ2 4.0 7.8 1.0 O5 C:BGC1 4.0 10.1 1.0 C4 A:GHP4 4.3 6.4 1.0 O A:HOH201 4.3 21.4 1.0 C6 C:BGC1 4.4 19.0 1.0 CD2 A:OMZ2 4.4 9.9 1.0 CG B:OMY6 4.5 8.4 1.0 ODE B:OMY6 4.5 9.8 1.0 C1 A:GHP4 4.6 5.3 1.0 O4 A:GHP4 4.7 7.6 1.0 CZ B:OMY6 4.7 10.0 1.0 C5 C:BGC1 4.8 10.4 1.0 O A:OMZ2 4.9 11.4 1.0 C1 C:BGC1 5.0 8.5 1.0 O A:ASN3 5.0 8.8 1.0

Chlorine binding site 2 out of 5 in the Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl6 b:9.6 occ:1.00 CL A:OMY6 0.0 9.6 1.0 CE1 A:OMY6 1.8 6.0 1.0 CD1 A:OMY6 2.7 8.2 1.0 CZ A:OMY6 2.7 7.2 1.0 OCZ A:OMY6 3.0 6.8 1.0 C3 A:GHP4 3.1 5.9 1.0 C2 A:GHP4 3.4 7.7 1.0 C3A C:RER2 3.5 9.5 1.0 C4 A:GHP4 3.6 6.4 1.0 C5 C:RER2 3.6 8.2 1.0 C4 C:RER2 3.9 8.7 1.0 C5A C:RER2 3.9 7.0 1.0 CG A:OMY6 3.9 7.3 1.0 CE2 A:OMY6 4.0 8.2 1.0 O4 A:GHP4 4.0 7.6 1.0 O A:GHP4 4.1 7.2 1.0 C1 A:GHP4 4.2 5.3 1.0 C3 C:RER2 4.3 9.4 1.0 C5 A:GHP4 4.4 7.6 1.0 O A:HOH216 4.5 21.1 1.0 O A:HOH208 4.5 11.7 1.0 CD2 A:OMY6 4.5 6.6 1.0 C A:GHP4 4.6 7.5 1.0 C6 A:GHP4 4.6 7.7 1.0 O5 C:RER2 4.8 6.5 1.0 CA A:GHP5 5.0 9.1 1.0

Chlorine binding site 3 out of 5 in the Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl2 b:11.6 occ:1.00 CL B:OMZ2 0.0 11.6 1.0 CE1 B:OMZ2 1.7 6.3 1.0 CD1 B:OMZ2 2.6 6.4 1.0 CZ B:OMZ2 2.6 6.5 1.0 OH B:OMZ2 2.9 7.7 1.0 C5 D:RER2 3.4 9.4 1.0 C5 B:GHP4 3.4 6.4 1.0 CD2 A:OMY6 3.4 6.6 1.0 C4 D:RER2 3.4 8.9 1.0 C5A D:RER2 3.5 8.9 1.0 CE2 A:OMY6 3.5 8.2 1.0 O A:HOH214 3.6 24.7 1.0 C6 B:GHP4 3.6 7.4 1.0 O A:HOH203 3.7 10.3 1.0 C3A D:RER2 3.7 8.8 1.0 CG B:OMZ2 3.9 9.1 1.0 CE2 B:OMZ2 3.9 9.2 1.0 C3 D:RER2 4.2 10.5 1.0 C4 B:GHP4 4.2 9.8 1.0 O B:HOH208 4.3 23.7 1.0 CG A:OMY6 4.4 7.3 1.0 CD2 B:OMZ2 4.4 8.9 1.0 ODE A:OMY6 4.5 6.9 1.0 O B:ASN3 4.6 8.4 1.0 CZ A:OMY6 4.6 7.2 1.0 O4 D:RER2 4.6 11.0 1.0 C1 B:GHP4 4.6 6.5 1.0 O4 B:GHP4 4.7 7.9 1.0 O5 D:RER2 4.7 9.2 1.0 N B:ASN3 4.9 8.7 1.0

Chlorine binding site 4 out of 5 in the Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl6 b:11.1 occ:1.00 CL B:OMY6 0.0 11.1 1.0 CE1 B:OMY6 1.8 9.4 1.0 CD1 B:OMY6 2.7 10.0 1.0 CZ B:OMY6 2.7 10.0 1.0 OCZ B:OMY6 3.0 8.8 1.0 C3 B:GHP4 3.1 7.0 1.0 O5 D:BGC1 3.2 10.4 1.0 C2 B:GHP4 3.4 7.4 1.0 O B:HOH210 3.4 19.8 1.0 C6 D:BGC1 3.5 17.9 1.0 O B:HOH206 3.6 17.2 1.0 C4 B:GHP4 3.7 9.8 1.0 C5 D:BGC1 3.7 11.4 1.0 O B:GHP4 3.9 6.1 1.0 CG B:OMY6 4.0 8.4 1.0 CE2 B:OMY6 4.0 9.6 1.0 C1 D:BGC1 4.1 9.5 1.0 C1 B:GHP4 4.1 6.5 1.0 O B:HOH223 4.1 24.8 1.0 O B:HOH224 4.2 30.8 1.0 O6 D:BGC1 4.2 15.4 1.0 O4 B:GHP4 4.3 7.9 1.0 C B:GHP4 4.4 5.4 1.0 C5 B:GHP4 4.4 6.4 1.0 CD2 B:OMY6 4.5 8.0 1.0 C6 B:GHP4 4.5 7.4 1.0 O B:HOH211 4.8 8.9 1.0 CA B:GHP5 4.9 5.7 1.0 CA B:GHP4 4.9 7.0 1.0 N B:GHP5 5.0 7.3 1.0

Chlorine binding site 5 out of 5 in the Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Microed Structure of Orthorhombic Vancomycin at 1.2 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl101 b:7.0 occ:1.00 N A:ASN3 3.0 7.5 1.0 N A:OMZ2 3.2 7.6 1.0 N A:GHP4 3.2 6.8 1.0 O A:GHP4 3.7 7.2 1.0 CA A:MLU1 3.7 9.1 1.0 CA A:ASN3 3.8 8.3 1.0 CB A:ASN3 3.8 9.8 1.0 C A:MLU1 3.9 8.0 1.0 CD2 A:OMZ2 3.9 9.9 1.0 C A:OMZ2 4.0 11.6 1.0 C A:ASN3 4.0 7.0 1.0 CD2 A:MLU1 4.0 32.7 1.0 CG A:MLU1 4.0 26.8 1.0 CE2 A:OMZ2 4.1 7.8 1.0 CA A:OMZ2 4.1 9.5 1.0 C6 A:GHP4 4.2 7.7 1.0 CA A:GHP4 4.2 8.3 1.0 C A:GHP4 4.4 7.5 1.0 CG A:ASN3 4.4 14.7 1.0 C1 A:GHP4 4.5 5.3 1.0 CG A:OMZ2 4.5 8.4 1.0 CB A:MLU1 4.5 12.3 1.0 ND2 A:ASN3 4.5 17.8 1.0 N A:MLU1 4.8 9.7 1.0 CN A:MLU1 4.9 10.5 1.0 CZ A:OMZ2 4.9 8.0 1.0 O A:HOH210 4.9 20.9 1.0 CB A:OMZ2 5.0 9.5 1.0

Q.Fan, L.Li, H.Xue, H.Zhou, L.Zhao, J.Liu, J.Mao, S.Wu, S.Zhang, C.Wu, X.Li, X.Zhou, J.Wang. Precise Control Over Kinetics of Molecular Assembly: Production of Particles with Tunable Sizes and Crystalline Forms. Angew.Chem.Int.Ed.Engl. 2020.
ISSN: ESSN 1521-3773
PubMed: 32432368
DOI: 10.1002/ANIE.202003922