Chlorine in PDB 7c4v: Microed Structure of Anorthic Vancomycin at 1.05 A Resolution
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution
(pdb code 7c4v). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the
Microed Structure of Anorthic Vancomycin at 1.05 A Resolution, PDB code: 7c4v:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
Chlorine binding site 1 out
of 5 in 7c4v
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Chlorine Binding Sites List in 7c4v
Chlorine binding site 1 out
of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl2
b:9.7
occ:1.00
|
CL
|
A:OMZ2
|
0.0
|
9.7
|
1.0
|
CE1
|
A:OMZ2
|
1.7
|
8.2
|
1.0
|
CZ
|
A:OMZ2
|
2.6
|
7.4
|
1.0
|
CD1
|
A:OMZ2
|
2.6
|
7.6
|
1.0
|
OH
|
A:OMZ2
|
2.9
|
7.0
|
1.0
|
C6
|
C:BGC1
|
3.4
|
8.8
|
1.0
|
C5
|
A:GHP4
|
3.4
|
5.9
|
1.0
|
O6
|
C:BGC1
|
3.4
|
9.0
|
1.0
|
O5
|
C:BGC1
|
3.6
|
7.6
|
1.0
|
C6
|
A:GHP4
|
3.7
|
5.6
|
1.0
|
CG
|
A:OMZ2
|
3.9
|
7.0
|
1.0
|
CE2
|
A:OMZ2
|
3.9
|
7.4
|
1.0
|
C5
|
C:BGC1
|
3.9
|
8.1
|
1.0
|
C4
|
A:GHP4
|
4.3
|
5.7
|
1.0
|
O
|
A:HOH217
|
4.3
|
13.2
|
1.0
|
CD2
|
A:OMZ2
|
4.4
|
7.1
|
1.0
|
O
|
A:ASN3
|
4.4
|
5.2
|
1.0
|
C1
|
C:BGC1
|
4.7
|
7.0
|
1.0
|
O4
|
A:GHP4
|
4.7
|
6.2
|
1.0
|
C1
|
A:GHP4
|
4.7
|
5.1
|
1.0
|
|
Chlorine binding site 2 out
of 5 in 7c4v
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Chlorine Binding Sites List in 7c4v
Chlorine binding site 2 out
of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl6
b:8.0
occ:1.00
|
CL
|
A:OMY6
|
0.0
|
8.0
|
1.0
|
CE1
|
A:OMY6
|
1.7
|
6.8
|
1.0
|
CD1
|
A:OMY6
|
2.7
|
6.2
|
1.0
|
CZ
|
A:OMY6
|
2.7
|
6.2
|
1.0
|
OCZ
|
A:OMY6
|
2.9
|
6.0
|
1.0
|
O
|
A:HOH213
|
3.0
|
16.0
|
1.0
|
C3
|
A:GHP4
|
3.2
|
5.6
|
1.0
|
C2
|
A:GHP4
|
3.4
|
5.4
|
1.0
|
C5
|
C:RER2
|
3.6
|
9.6
|
1.0
|
C5A
|
C:RER2
|
3.6
|
9.6
|
1.0
|
C4
|
C:RER2
|
3.8
|
10.2
|
1.0
|
CG
|
A:OMY6
|
3.9
|
5.5
|
1.0
|
CE2
|
A:OMY6
|
4.0
|
5.8
|
1.0
|
C4
|
A:GHP4
|
4.0
|
5.7
|
1.0
|
C3A
|
C:RER2
|
4.1
|
10.0
|
1.0
|
O
|
A:HOH220
|
4.1
|
13.5
|
1.0
|
O
|
A:GHP4
|
4.1
|
4.6
|
1.0
|
C1
|
A:GHP4
|
4.4
|
5.1
|
1.0
|
O4
|
A:GHP4
|
4.5
|
6.2
|
1.0
|
CD2
|
A:OMY6
|
4.5
|
5.4
|
1.0
|
C3
|
C:RER2
|
4.6
|
9.9
|
1.0
|
C
|
A:GHP4
|
4.7
|
4.6
|
1.0
|
C5
|
A:GHP4
|
4.8
|
5.9
|
1.0
|
O5
|
C:RER2
|
4.9
|
9.0
|
1.0
|
C6
|
A:GHP4
|
4.9
|
5.6
|
1.0
|
O4
|
C:RER2
|
4.9
|
10.7
|
1.0
|
|
Chlorine binding site 3 out
of 5 in 7c4v
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Chlorine Binding Sites List in 7c4v
Chlorine binding site 3 out
of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl2
b:9.9
occ:1.00
|
CL
|
B:OMZ2
|
0.0
|
9.9
|
1.0
|
CE1
|
B:OMZ2
|
1.7
|
8.6
|
1.0
|
CZ
|
B:OMZ2
|
2.6
|
8.2
|
1.0
|
CD1
|
B:OMZ2
|
2.6
|
8.0
|
1.0
|
OH
|
B:OMZ2
|
2.9
|
7.9
|
1.0
|
C5
|
B:GHP4
|
3.5
|
7.3
|
1.0
|
C6
|
B:GHP4
|
3.7
|
6.4
|
1.0
|
C6
|
D:BGC1
|
3.9
|
13.6
|
1.0
|
CG
|
B:OMZ2
|
3.9
|
7.5
|
1.0
|
CE2
|
B:OMZ2
|
3.9
|
7.9
|
1.0
|
O
|
B:HOH117
|
4.0
|
13.6
|
1.0
|
O5
|
D:BGC1
|
4.0
|
12.2
|
1.0
|
CD2
|
B:OMZ2
|
4.4
|
7.8
|
1.0
|
O
|
B:ASN3
|
4.5
|
6.4
|
1.0
|
C4
|
B:GHP4
|
4.5
|
7.5
|
1.0
|
C5
|
D:BGC1
|
4.5
|
13.1
|
1.0
|
C1
|
B:GHP4
|
4.8
|
6.0
|
1.0
|
O4
|
B:GHP4
|
5.0
|
9.2
|
1.0
|
|
Chlorine binding site 4 out
of 5 in 7c4v
Go back to
Chlorine Binding Sites List in 7c4v
Chlorine binding site 4 out
of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl6
b:9.5
occ:1.00
|
CL
|
B:OMY6
|
0.0
|
9.5
|
1.0
|
CE1
|
B:OMY6
|
1.7
|
8.5
|
1.0
|
CD1
|
B:OMY6
|
2.6
|
8.2
|
1.0
|
CZ
|
B:OMY6
|
2.8
|
7.9
|
1.0
|
O
|
B:HOH109
|
2.9
|
12.0
|
1.0
|
O
|
B:HOH103
|
2.9
|
15.3
|
1.0
|
O
|
B:HOH118
|
3.1
|
9.8
|
1.0
|
OCZ
|
B:OMY6
|
3.1
|
7.4
|
1.0
|
O
|
B:HOH121
|
3.1
|
12.6
|
1.0
|
C3A
|
D:RER2
|
3.3
|
14.2
|
1.0
|
C3
|
B:GHP4
|
3.3
|
7.0
|
1.0
|
C2
|
B:GHP4
|
3.5
|
6.3
|
1.0
|
O
|
B:HOH114
|
3.7
|
9.2
|
1.0
|
CG
|
B:OMY6
|
3.9
|
7.8
|
1.0
|
CE2
|
B:OMY6
|
4.0
|
7.9
|
1.0
|
O
|
B:GHP4
|
4.1
|
5.9
|
1.0
|
C4
|
B:GHP4
|
4.3
|
7.5
|
1.0
|
O
|
B:HOH123
|
4.4
|
13.0
|
1.0
|
C1
|
B:GHP4
|
4.5
|
6.0
|
1.0
|
CD2
|
B:OMY6
|
4.5
|
7.9
|
1.0
|
C
|
B:GHP4
|
4.7
|
5.6
|
1.0
|
C3
|
D:RER2
|
4.7
|
14.0
|
1.0
|
O4
|
B:GHP4
|
4.8
|
9.2
|
1.0
|
O
|
B:HOH110
|
4.8
|
7.0
|
1.0
|
|
Chlorine binding site 5 out
of 5 in 7c4v
Go back to
Chlorine Binding Sites List in 7c4v
Chlorine binding site 5 out
of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl101
b:5.7
occ:1.00
|
N
|
A:GHP5
|
3.2
|
4.2
|
1.0
|
O
|
A:HOH212
|
3.2
|
15.8
|
1.0
|
CA
|
A:GHP4
|
3.4
|
4.9
|
1.0
|
O
|
A:GHP5
|
3.6
|
4.4
|
1.0
|
C
|
A:GHP4
|
3.7
|
4.6
|
1.0
|
O
|
A:ASN3
|
3.8
|
5.2
|
1.0
|
CA
|
A:GHP5
|
4.2
|
3.8
|
1.0
|
N
|
A:GHP4
|
4.3
|
4.7
|
1.0
|
C1
|
A:GHP4
|
4.3
|
5.1
|
1.0
|
C
|
A:GHP5
|
4.3
|
4.1
|
1.0
|
C
|
A:ASN3
|
4.4
|
4.9
|
1.0
|
C6
|
A:GHP5
|
4.4
|
4.1
|
1.0
|
C1
|
A:GHP5
|
4.7
|
3.5
|
1.0
|
C2
|
A:GHP4
|
4.8
|
5.4
|
1.0
|
O
|
A:GHP4
|
4.9
|
4.6
|
1.0
|
|
Reference:
Q.Fan,
L.Li,
H.Xue,
H.Zhou,
L.Zhao,
J.Liu,
J.Mao,
S.Wu,
S.Zhang,
C.Wu,
X.Li,
X.Zhou,
J.Wang.
Precise Control Over Kinetics of Molecular Assembly: Production of Particles with Tunable Sizes and Crystalline Forms. Angew.Chem.Int.Ed.Engl. 2020.
ISSN: ESSN 1521-3773
PubMed: 32432368
DOI: 10.1002/ANIE.202003922
Page generated: Mon Jul 29 19:25:52 2024
|