Chlorine in PDB 7cvt: Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment
Protein crystallography data
The structure of Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment, PDB code: 7cvt
was solved by
K.Park,
K.Mersch,
J.Robertson,
H.-H.Lim,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
50.00 /
2.90
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
233.034,
98.305,
172.434,
90,
131.99,
90
|
R / Rfree (%)
|
20.1 /
24.1
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment
(pdb code 7cvt). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment, PDB code: 7cvt:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 7cvt
Go back to
Chlorine Binding Sites List in 7cvt
Chlorine binding site 1 out
of 3 in the Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl501
b:114.2
occ:1.00
|
OH
|
A:TYR445
|
2.7
|
132.3
|
1.0
|
N
|
A:ILE356
|
3.1
|
112.6
|
1.0
|
OG
|
A:SER107
|
3.2
|
112.6
|
1.0
|
CA
|
A:GLY355
|
3.3
|
106.3
|
1.0
|
N
|
A:PHE357
|
3.4
|
85.7
|
1.0
|
CB
|
A:SER107
|
3.6
|
116.8
|
1.0
|
CB
|
A:PHE357
|
3.7
|
100.0
|
1.0
|
CD1
|
A:ILE109
|
3.7
|
100.0
|
1.0
|
CZ
|
A:TYR445
|
3.7
|
115.9
|
1.0
|
C
|
A:GLY355
|
3.7
|
111.0
|
1.0
|
CG2
|
A:ILE356
|
4.0
|
89.8
|
1.0
|
CG
|
A:GLU148
|
4.1
|
117.3
|
1.0
|
CE1
|
A:TYR445
|
4.1
|
90.2
|
1.0
|
OE2
|
A:GLU148
|
4.1
|
95.4
|
1.0
|
CA
|
A:ILE356
|
4.1
|
95.6
|
1.0
|
CA
|
A:PHE357
|
4.1
|
88.3
|
1.0
|
CA
|
A:GLY149
|
4.2
|
91.5
|
1.0
|
C
|
A:ILE356
|
4.2
|
87.8
|
1.0
|
CA
|
A:SER107
|
4.4
|
118.6
|
1.0
|
N
|
A:GLY149
|
4.4
|
88.1
|
1.0
|
CG1
|
A:ILE109
|
4.5
|
80.7
|
1.0
|
CB
|
A:ILE356
|
4.6
|
101.4
|
1.0
|
CD
|
A:GLU148
|
4.6
|
114.9
|
1.0
|
N
|
A:GLY355
|
4.7
|
97.3
|
1.0
|
CG
|
A:PHE357
|
4.8
|
104.4
|
1.0
|
CE2
|
A:TYR445
|
4.9
|
118.1
|
1.0
|
O
|
A:GLY355
|
5.0
|
111.3
|
1.0
|
CD2
|
A:PHE357
|
5.0
|
99.7
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 7cvt
Go back to
Chlorine Binding Sites List in 7cvt
Chlorine binding site 2 out
of 3 in the Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl502
b:360.1
occ:1.00
|
N
|
A:SER107
|
3.1
|
121.1
|
1.0
|
CA
|
A:GLY106
|
3.7
|
112.6
|
1.0
|
C
|
A:GLY106
|
3.9
|
112.6
|
1.0
|
CZ
|
A:PHE348
|
3.9
|
99.8
|
1.0
|
CB
|
A:SER107
|
3.9
|
116.8
|
1.0
|
CG2
|
A:ILE448
|
4.0
|
95.3
|
1.0
|
CA
|
A:SER107
|
4.1
|
118.6
|
1.0
|
O
|
A:GLY105
|
4.2
|
121.1
|
1.0
|
N
|
A:GLY108
|
4.3
|
114.5
|
1.0
|
CG
|
A:PRO110
|
4.4
|
100.1
|
1.0
|
CE1
|
A:PHE348
|
4.5
|
89.5
|
1.0
|
CD1
|
A:ILE448
|
4.5
|
88.1
|
1.0
|
CD
|
A:PRO110
|
4.5
|
106.1
|
1.0
|
CE2
|
A:PHE348
|
4.7
|
109.2
|
1.0
|
N
|
A:GLY106
|
4.7
|
112.3
|
1.0
|
C
|
A:SER107
|
4.7
|
117.9
|
1.0
|
NE2
|
A:GLN277
|
4.8
|
118.4
|
1.0
|
C
|
A:GLY105
|
4.8
|
106.0
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 7cvt
Go back to
Chlorine Binding Sites List in 7cvt
Chlorine binding site 3 out
of 3 in the Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl501
b:104.0
occ:1.00
|
N
|
B:ILE356
|
2.7
|
96.1
|
1.0
|
OH
|
B:TYR445
|
2.8
|
114.5
|
1.0
|
N
|
B:PHE357
|
3.2
|
113.3
|
1.0
|
CA
|
B:GLY355
|
3.3
|
119.4
|
1.0
|
OG
|
B:SER107
|
3.5
|
118.8
|
1.0
|
C
|
B:GLY355
|
3.5
|
103.4
|
1.0
|
CB
|
B:SER107
|
3.5
|
100.4
|
1.0
|
CG2
|
B:ILE356
|
3.5
|
84.6
|
1.0
|
CA
|
B:ILE356
|
3.6
|
104.3
|
1.0
|
CZ
|
B:TYR445
|
3.7
|
118.8
|
1.0
|
CE1
|
B:TYR445
|
3.8
|
105.7
|
1.0
|
C
|
B:ILE356
|
3.8
|
110.7
|
1.0
|
CB
|
B:PHE357
|
3.9
|
100.4
|
1.0
|
CB
|
B:ILE356
|
4.0
|
105.8
|
1.0
|
OE1
|
B:GLU148
|
4.0
|
132.5
|
1.0
|
CA
|
B:PHE357
|
4.1
|
110.1
|
1.0
|
CG
|
B:GLU148
|
4.3
|
120.6
|
1.0
|
CA
|
B:SER107
|
4.5
|
110.9
|
1.0
|
CD
|
B:GLU148
|
4.6
|
132.2
|
1.0
|
O
|
B:GLY355
|
4.7
|
92.3
|
1.0
|
N
|
B:GLY355
|
4.7
|
126.6
|
1.0
|
CE2
|
B:PHE348
|
4.8
|
120.3
|
1.0
|
CE2
|
B:TYR445
|
5.0
|
130.4
|
1.0
|
|
Reference:
K.Park,
K.Mersch,
J.Robertson,
H.-H.Lim.
Crystal Structure of the C85A/L194A/H234C Mutant Clc-EC1 with Fab Fragment To Be Published.
Page generated: Mon Jul 29 19:55:46 2024
|