Chlorine in PDB 7d4p: Structure of Human TRPC5 in Complex with Clemizole
Other elements in 7d4p:
The structure of Structure of Human TRPC5 in Complex with Clemizole also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Structure of Human TRPC5 in Complex with Clemizole
(pdb code 7d4p). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Structure of Human TRPC5 in Complex with Clemizole, PDB code: 7d4p:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 7d4p
Go back to
Chlorine Binding Sites List in 7d4p
Chlorine binding site 1 out
of 4 in the Structure of Human TRPC5 in Complex with Clemizole
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Structure of Human TRPC5 in Complex with Clemizole within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl801
b:109.5
occ:1.00
|
CL
|
A:GX0801
|
0.0
|
109.5
|
1.0
|
C18
|
A:GX0801
|
1.8
|
105.2
|
1.0
|
C17
|
A:GX0801
|
2.8
|
100.4
|
1.0
|
C16
|
A:GX0801
|
2.8
|
98.2
|
1.0
|
CE2
|
A:TYR446
|
3.2
|
79.2
|
1.0
|
CB
|
A:MET442
|
3.4
|
86.4
|
1.0
|
CD2
|
A:TYR446
|
3.5
|
83.3
|
1.0
|
CD2
|
A:PHE414
|
3.8
|
95.4
|
1.0
|
SD
|
A:MET442
|
3.8
|
87.9
|
1.0
|
C15
|
A:GX0801
|
4.1
|
97.5
|
1.0
|
C14
|
A:GX0801
|
4.1
|
100.6
|
1.0
|
OG
|
A:SER489
|
4.1
|
74.0
|
1.0
|
CG
|
A:MET442
|
4.1
|
85.1
|
1.0
|
ND2
|
A:ASN443
|
4.1
|
98.9
|
1.0
|
CE2
|
A:PHE414
|
4.3
|
95.1
|
1.0
|
CG
|
A:PHE414
|
4.4
|
94.0
|
1.0
|
C
|
A:MET442
|
4.4
|
81.3
|
1.0
|
CA
|
A:MET442
|
4.5
|
81.0
|
1.0
|
CZ
|
A:TYR446
|
4.5
|
83.6
|
1.0
|
N
|
A:ASN443
|
4.5
|
86.1
|
1.0
|
CB
|
A:PHE414
|
4.5
|
90.1
|
1.0
|
C9
|
A:GX0801
|
4.6
|
100.6
|
1.0
|
CG
|
A:TYR446
|
4.8
|
83.5
|
1.0
|
CE
|
A:MET442
|
4.9
|
89.0
|
1.0
|
O
|
A:MET442
|
4.9
|
84.4
|
1.0
|
CG
|
A:ASN443
|
4.9
|
98.0
|
1.0
|
OH
|
A:TYR446
|
5.0
|
86.9
|
1.0
|
CE2
|
A:PHE377
|
5.0
|
76.2
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 7d4p
Go back to
Chlorine Binding Sites List in 7d4p
Chlorine binding site 2 out
of 4 in the Structure of Human TRPC5 in Complex with Clemizole
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Structure of Human TRPC5 in Complex with Clemizole within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl801
b:109.5
occ:1.00
|
CL
|
B:GX0801
|
0.0
|
109.5
|
1.0
|
C18
|
B:GX0801
|
1.8
|
105.2
|
1.0
|
C17
|
B:GX0801
|
2.8
|
100.4
|
1.0
|
C16
|
B:GX0801
|
2.8
|
98.2
|
1.0
|
CE2
|
B:TYR446
|
3.2
|
79.2
|
1.0
|
CB
|
B:MET442
|
3.4
|
86.4
|
1.0
|
CD2
|
B:TYR446
|
3.5
|
83.3
|
1.0
|
CD2
|
B:PHE414
|
3.8
|
95.4
|
1.0
|
SD
|
B:MET442
|
3.8
|
87.9
|
1.0
|
C15
|
B:GX0801
|
4.1
|
97.5
|
1.0
|
C14
|
B:GX0801
|
4.1
|
100.6
|
1.0
|
OG
|
B:SER489
|
4.1
|
74.0
|
1.0
|
CG
|
B:MET442
|
4.1
|
85.1
|
1.0
|
ND2
|
B:ASN443
|
4.1
|
98.9
|
1.0
|
CE2
|
B:PHE414
|
4.3
|
95.1
|
1.0
|
CG
|
B:PHE414
|
4.4
|
94.0
|
1.0
|
C
|
B:MET442
|
4.4
|
81.3
|
1.0
|
CA
|
B:MET442
|
4.5
|
81.0
|
1.0
|
CZ
|
B:TYR446
|
4.5
|
83.6
|
1.0
|
N
|
B:ASN443
|
4.5
|
86.1
|
1.0
|
CB
|
B:PHE414
|
4.5
|
90.1
|
1.0
|
C9
|
B:GX0801
|
4.6
|
100.6
|
1.0
|
CG
|
B:TYR446
|
4.8
|
83.5
|
1.0
|
CE
|
B:MET442
|
4.9
|
89.0
|
1.0
|
O
|
B:MET442
|
4.9
|
84.4
|
1.0
|
CG
|
B:ASN443
|
4.9
|
98.0
|
1.0
|
OH
|
B:TYR446
|
5.0
|
86.9
|
1.0
|
CE2
|
B:PHE377
|
5.0
|
76.2
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 7d4p
Go back to
Chlorine Binding Sites List in 7d4p
Chlorine binding site 3 out
of 4 in the Structure of Human TRPC5 in Complex with Clemizole
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Structure of Human TRPC5 in Complex with Clemizole within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl801
b:109.5
occ:1.00
|
CL
|
C:GX0801
|
0.0
|
109.5
|
1.0
|
C18
|
C:GX0801
|
1.8
|
105.2
|
1.0
|
C17
|
C:GX0801
|
2.8
|
100.4
|
1.0
|
C16
|
C:GX0801
|
2.8
|
98.2
|
1.0
|
CE2
|
C:TYR446
|
3.2
|
79.2
|
1.0
|
CB
|
C:MET442
|
3.4
|
86.4
|
1.0
|
CD2
|
C:TYR446
|
3.5
|
83.3
|
1.0
|
CD2
|
C:PHE414
|
3.8
|
95.4
|
1.0
|
SD
|
C:MET442
|
3.8
|
87.9
|
1.0
|
C15
|
C:GX0801
|
4.1
|
97.5
|
1.0
|
C14
|
C:GX0801
|
4.1
|
100.6
|
1.0
|
OG
|
C:SER489
|
4.1
|
74.0
|
1.0
|
CG
|
C:MET442
|
4.1
|
85.1
|
1.0
|
ND2
|
C:ASN443
|
4.1
|
98.9
|
1.0
|
CE2
|
C:PHE414
|
4.3
|
95.1
|
1.0
|
CG
|
C:PHE414
|
4.4
|
94.0
|
1.0
|
C
|
C:MET442
|
4.4
|
81.3
|
1.0
|
CA
|
C:MET442
|
4.5
|
81.0
|
1.0
|
CZ
|
C:TYR446
|
4.5
|
83.6
|
1.0
|
N
|
C:ASN443
|
4.5
|
86.1
|
1.0
|
CB
|
C:PHE414
|
4.5
|
90.1
|
1.0
|
C9
|
C:GX0801
|
4.6
|
100.6
|
1.0
|
CG
|
C:TYR446
|
4.8
|
83.5
|
1.0
|
CE
|
C:MET442
|
4.9
|
89.0
|
1.0
|
O
|
C:MET442
|
4.9
|
84.4
|
1.0
|
CG
|
C:ASN443
|
4.9
|
98.0
|
1.0
|
OH
|
C:TYR446
|
5.0
|
86.9
|
1.0
|
CE2
|
C:PHE377
|
5.0
|
76.2
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 7d4p
Go back to
Chlorine Binding Sites List in 7d4p
Chlorine binding site 4 out
of 4 in the Structure of Human TRPC5 in Complex with Clemizole
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Structure of Human TRPC5 in Complex with Clemizole within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl801
b:109.5
occ:1.00
|
CL
|
D:GX0801
|
0.0
|
109.5
|
1.0
|
C18
|
D:GX0801
|
1.8
|
105.2
|
1.0
|
C17
|
D:GX0801
|
2.8
|
100.4
|
1.0
|
C16
|
D:GX0801
|
2.8
|
98.2
|
1.0
|
CE2
|
D:TYR446
|
3.2
|
79.2
|
1.0
|
CB
|
D:MET442
|
3.4
|
86.4
|
1.0
|
CD2
|
D:TYR446
|
3.5
|
83.3
|
1.0
|
CD2
|
D:PHE414
|
3.8
|
95.4
|
1.0
|
SD
|
D:MET442
|
3.8
|
87.9
|
1.0
|
C15
|
D:GX0801
|
4.1
|
97.5
|
1.0
|
C14
|
D:GX0801
|
4.1
|
100.6
|
1.0
|
OG
|
D:SER489
|
4.1
|
74.0
|
1.0
|
CG
|
D:MET442
|
4.1
|
85.1
|
1.0
|
ND2
|
D:ASN443
|
4.1
|
98.9
|
1.0
|
CE2
|
D:PHE414
|
4.3
|
95.1
|
1.0
|
CG
|
D:PHE414
|
4.4
|
94.0
|
1.0
|
C
|
D:MET442
|
4.4
|
81.3
|
1.0
|
CA
|
D:MET442
|
4.5
|
81.0
|
1.0
|
CZ
|
D:TYR446
|
4.5
|
83.6
|
1.0
|
N
|
D:ASN443
|
4.5
|
86.1
|
1.0
|
CB
|
D:PHE414
|
4.5
|
90.1
|
1.0
|
C9
|
D:GX0801
|
4.6
|
100.6
|
1.0
|
CG
|
D:TYR446
|
4.8
|
83.5
|
1.0
|
CE
|
D:MET442
|
4.9
|
89.0
|
1.0
|
O
|
D:MET442
|
4.9
|
84.4
|
1.0
|
CG
|
D:ASN443
|
4.9
|
98.0
|
1.0
|
OH
|
D:TYR446
|
5.0
|
86.9
|
1.0
|
CE2
|
D:PHE377
|
5.0
|
76.2
|
1.0
|
|
Reference:
L.Chen,
K.Song,
M.Wei,
W.Guo.
Structure of Human TRPC5 in Complex with Clemizole To Be Published.
Page generated: Mon Jul 29 19:59:07 2024
|