Chlorine in PDB 7d5g: Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism

All present enzymatic activity of Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism:
5.1.3.11;

The structure of Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism, PDB code: 7d5g was solved by R.J.Yang, Y.H.Feng, J.F.Andrew, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	66.49 / 1.60
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	90.729, 90.729, 97.723, 90, 90, 90
R / Rfree (%)	16.6 / 20.2

The binding sites of Chlorine atom in the Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism (pdb code 7d5g). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism, PDB code: 7d5g:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl401 b:14.6 occ:1.00 O A:HOH596 3.1 13.7 1.0 NH1 A:ARG56 3.3 15.2 1.0 N A:CYS374 3.3 11.2 1.0 N A:HIS377 3.4 13.9 1.0 O A:CYS374 3.4 13.5 1.0 CB A:CYS374 3.4 16.3 1.0 N A:TYR376 3.4 13.7 1.0 C A:CYS374 3.5 13.1 1.0 CA A:CYS374 3.6 13.5 1.0 CD2 A:HIS377 3.6 12.6 1.0 CB A:TYR376 3.7 13.2 1.0 CD2 A:TYR376 3.8 12.4 1.0 CD A:ARG56 3.9 12.5 1.0 CA A:TYR376 4.0 12.7 1.0 SG A:CYS374 4.0 15.0 1.0 C A:TYR376 4.1 14.6 1.0 CZ A:ARG56 4.1 15.1 1.0 CB A:HIS377 4.2 11.0 1.0 CG A:HIS377 4.2 12.2 1.0 N A:PRO375 4.2 12.3 1.0 O6 B:FRU1 4.2 29.0 1.0 CG A:TYR376 4.3 12.9 1.0 CZ2 A:TRP307 4.3 14.3 1.0 CA A:HIS377 4.4 14.3 1.0 NE A:ARG56 4.4 11.6 1.0 C A:LYS373 4.4 16.2 1.0 C A:PRO375 4.4 12.2 1.0 HO6 B:FRU1 4.5 34.8 1.0 O A:TRP372 4.6 16.3 1.0 CA A:LYS373 4.6 15.3 1.0 NE1 A:TRP307 4.7 14.6 1.0 NE2 A:HIS377 4.7 13.6 1.0 CA A:PRO375 4.7 14.1 1.0 CE2 A:TRP307 4.9 12.7 1.0 CE2 A:TYR376 4.9 11.8 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl402 b:52.4 occ:1.00 OD2 A:ASP256 2.8 28.2 1.0 O A:GLU272 2.9 21.9 1.0 O A:HOH807 3.0 41.7 1.0 OD1 A:ASP256 3.1 31.0 1.0 CG A:LEU276 3.2 22.6 0.5 CG A:ASP256 3.3 27.0 1.0 C A:GLU272 3.6 19.8 1.0 CD1 A:LEU276 3.6 24.3 0.5 CA A:GLU272 3.7 18.1 1.0 CB A:GLU272 3.7 22.5 1.0 CD2 A:LEU276 3.8 22.9 0.5 CG A:LYS323 3.9 26.2 1.0 CB A:ALA275 4.2 17.7 1.0 N A:LEU276 4.2 17.6 0.5 N A:LEU276 4.3 17.6 0.5 CB A:LYS323 4.3 20.5 1.0 CB A:LEU276 4.3 21.0 0.5 CG A:GLU272 4.3 26.0 1.0 CB A:LEU276 4.3 21.0 0.5 CD A:LYS323 4.4 30.0 1.0 O A:HOH788 4.5 34.4 1.0 CE A:LYS323 4.6 40.0 1.0 CA A:LEU276 4.7 18.0 0.5 CA A:LEU276 4.7 18.0 0.5 CB A:ASP256 4.8 20.1 1.0 N A:LYS273 4.8 17.6 1.0 C A:ALA275 4.9 16.4 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl403 b:28.4 occ:1.00 O A:HOH672 3.1 40.1 1.0 ND2 A:ASN86 3.2 18.6 1.0 CB A:ASN86 3.7 16.1 1.0 O A:GLU82 3.8 13.8 1.0 CG A:ASN86 3.9 19.5 1.0 CD1 A:PHE83 3.9 15.0 1.0 CA A:PHE83 3.9 13.1 1.0 C A:GLU82 4.0 12.3 1.0 O A:HOH636 4.1 15.7 1.0 N A:PHE83 4.1 12.3 1.0 CB A:GLU82 4.4 16.0 1.0 CG A:LYS87 4.6 16.7 1.0 CB A:PHE83 4.6 12.2 1.0 CE A:LYS87 4.7 22.7 1.0 CG A:PHE83 4.7 14.3 1.0 CE1 A:PHE83 4.8 18.0 1.0 CA A:GLU82 4.8 13.7 1.0 CA A:GLY31 4.9 16.6 1.0

R.J.Yang, Y.H.Feng, J.F.Andrew. Crystal Structure of the Csce with Ligand to Have A Insight Into the Catalytic Mechanism To Be Published.