Chlorine in PDB 7dd5: Structure of Calcium-Sensing Receptor in Complex with Nps-2143
Other elements in 7dd5:
The structure of Structure of Calcium-Sensing Receptor in Complex with Nps-2143 also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Structure of Calcium-Sensing Receptor in Complex with Nps-2143
(pdb code 7dd5). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Structure of Calcium-Sensing Receptor in Complex with Nps-2143, PDB code: 7dd5:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 7dd5
Go back to
Chlorine Binding Sites List in 7dd5
Chlorine binding site 1 out
of 4 in the Structure of Calcium-Sensing Receptor in Complex with Nps-2143
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Structure of Calcium-Sensing Receptor in Complex with Nps-2143 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1101
b:143.6
occ:1.00
|
NH1
|
A:ARG69
|
2.8
|
126.0
|
1.0
|
NH2
|
A:ARG66
|
3.3
|
130.3
|
1.0
|
NE
|
A:ARG66
|
3.3
|
130.3
|
1.0
|
CZ
|
A:ARG66
|
3.8
|
130.3
|
1.0
|
CZ
|
A:ARG69
|
3.8
|
126.0
|
1.0
|
NH2
|
A:ARG69
|
3.9
|
126.0
|
1.0
|
NE1
|
A:TRP70
|
3.9
|
126.7
|
1.0
|
N
|
A:ARG414
|
4.0
|
134.9
|
1.0
|
N
|
A:ILE415
|
4.1
|
132.4
|
1.0
|
OG
|
A:SER416
|
4.3
|
136.3
|
1.0
|
CD
|
A:ARG66
|
4.5
|
130.3
|
1.0
|
CG
|
A:ARG66
|
4.6
|
130.3
|
1.0
|
O
|
A:HIS412
|
4.6
|
148.3
|
1.0
|
N
|
A:SER416
|
4.6
|
136.3
|
1.0
|
CB
|
A:ILE415
|
4.7
|
132.4
|
1.0
|
CG1
|
A:ILE415
|
4.7
|
132.4
|
1.0
|
CA
|
A:LEU413
|
4.7
|
142.3
|
1.0
|
CB
|
A:ARG414
|
4.8
|
134.9
|
1.0
|
CA
|
A:ARG414
|
4.8
|
134.9
|
1.0
|
CD1
|
A:TRP70
|
4.8
|
126.7
|
1.0
|
CE2
|
A:TRP70
|
4.8
|
126.7
|
1.0
|
CA
|
A:ILE415
|
4.9
|
132.4
|
1.0
|
C
|
A:LEU413
|
4.9
|
142.3
|
1.0
|
C
|
A:ARG414
|
4.9
|
134.9
|
1.0
|
CZ2
|
A:TRP70
|
5.0
|
126.7
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 7dd5
Go back to
Chlorine Binding Sites List in 7dd5
Chlorine binding site 2 out
of 4 in the Structure of Calcium-Sensing Receptor in Complex with Nps-2143
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Structure of Calcium-Sensing Receptor in Complex with Nps-2143 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1109
b:268.2
occ:1.00
|
CL1
|
A:YP11109
|
0.0
|
268.2
|
1.0
|
C20
|
A:YP11109
|
1.8
|
268.2
|
1.0
|
C19
|
A:YP11109
|
2.8
|
268.2
|
1.0
|
C21
|
A:YP11109
|
2.8
|
268.2
|
1.0
|
C24
|
A:YP11109
|
3.0
|
268.2
|
1.0
|
CD1
|
A:ILE840
|
3.1
|
283.7
|
1.0
|
N1
|
A:YP11109
|
3.7
|
268.2
|
1.0
|
CZ
|
A:PHE683
|
4.0
|
295.2
|
1.0
|
C18
|
A:YP11109
|
4.0
|
268.2
|
1.0
|
C22
|
A:YP11109
|
4.0
|
268.2
|
1.0
|
CD1
|
A:TRP817
|
4.1
|
281.7
|
1.0
|
CG1
|
A:VAL816
|
4.3
|
292.5
|
1.0
|
CE1
|
A:PHE683
|
4.3
|
295.2
|
1.0
|
C23
|
A:YP11109
|
4.6
|
268.2
|
1.0
|
CG1
|
A:ILE840
|
4.6
|
283.7
|
1.0
|
CE1
|
A:PHE813
|
4.8
|
300.8
|
1.0
|
CA
|
A:TRP817
|
4.9
|
281.7
|
1.0
|
NE1
|
A:TRP817
|
5.0
|
281.7
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 7dd5
Go back to
Chlorine Binding Sites List in 7dd5
Chlorine binding site 3 out
of 4 in the Structure of Calcium-Sensing Receptor in Complex with Nps-2143
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Structure of Calcium-Sensing Receptor in Complex with Nps-2143 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1101
b:142.9
occ:1.00
|
NH1
|
B:ARG69
|
3.2
|
134.7
|
1.0
|
NH2
|
B:ARG66
|
3.6
|
135.2
|
1.0
|
NE
|
B:ARG66
|
3.8
|
135.2
|
1.0
|
N
|
B:ARG414
|
3.8
|
141.5
|
1.0
|
O
|
B:HIS412
|
3.9
|
152.8
|
1.0
|
N
|
B:ILE415
|
4.1
|
132.3
|
1.0
|
CZ
|
B:ARG69
|
4.2
|
134.7
|
1.0
|
NH2
|
B:ARG69
|
4.2
|
134.7
|
1.0
|
CZ
|
B:ARG66
|
4.2
|
135.2
|
1.0
|
CB
|
B:ARG414
|
4.4
|
141.5
|
1.0
|
OG
|
B:SER416
|
4.4
|
133.4
|
1.0
|
CA
|
B:ARG414
|
4.5
|
141.5
|
1.0
|
NE1
|
B:TRP70
|
4.6
|
131.4
|
1.0
|
CA
|
B:LEU413
|
4.7
|
146.1
|
1.0
|
C
|
B:LEU413
|
4.7
|
146.1
|
1.0
|
CB
|
B:ILE415
|
4.8
|
132.3
|
1.0
|
C
|
B:ARG414
|
4.8
|
141.5
|
1.0
|
N
|
B:SER416
|
4.9
|
133.4
|
1.0
|
CD
|
B:ARG66
|
4.9
|
135.2
|
1.0
|
C
|
B:HIS412
|
4.9
|
152.8
|
1.0
|
CG
|
B:ARG414
|
5.0
|
141.5
|
1.0
|
CA
|
B:ILE415
|
5.0
|
132.3
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 7dd5
Go back to
Chlorine Binding Sites List in 7dd5
Chlorine binding site 4 out
of 4 in the Structure of Calcium-Sensing Receptor in Complex with Nps-2143
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Structure of Calcium-Sensing Receptor in Complex with Nps-2143 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1108
b:285.6
occ:1.00
|
CL1
|
B:YP11108
|
0.0
|
285.6
|
1.0
|
C20
|
B:YP11108
|
1.8
|
285.6
|
1.0
|
C21
|
B:YP11108
|
2.8
|
285.6
|
1.0
|
C19
|
B:YP11108
|
2.8
|
285.6
|
1.0
|
C24
|
B:YP11108
|
3.0
|
285.6
|
1.0
|
N1
|
B:YP11108
|
3.7
|
285.6
|
1.0
|
C18
|
B:YP11108
|
4.0
|
285.6
|
1.0
|
C22
|
B:YP11108
|
4.0
|
285.6
|
1.0
|
CD1
|
B:TRP817
|
4.2
|
291.0
|
1.0
|
CE1
|
B:PHE683
|
4.5
|
299.0
|
1.0
|
CG1
|
B:VAL816
|
4.6
|
305.8
|
1.0
|
C23
|
B:YP11108
|
4.6
|
285.6
|
1.0
|
CZ
|
B:PHE683
|
4.8
|
299.0
|
1.0
|
CA
|
B:TRP817
|
4.9
|
291.0
|
1.0
|
CE1
|
B:PHE813
|
5.0
|
311.7
|
1.0
|
|
Reference:
T.L.Wen,
Z.Y.Wang,
X.Z.Chen,
Y.Ren,
X.H.Lu,
Y.F.Xing,
J.Lu,
S.H.Chang,
X.Zhang,
Y.Q.Shen,
X.Yang.
Structural Basis For Activation and Allosteric Modulation of Full-Length Calcium-Sensing Receptor. Sci Adv 2021.
ISSN: ESSN 2375-2548
PubMed: 34088669
DOI: 10.1126/SCIADV.ABG1483
Page generated: Mon Jul 29 20:03:10 2024
|