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Chlorine in PDB 7f9r: Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L95, L-Proline and Febrifugine

Protein crystallography data

The structure of Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L95, L-Proline and Febrifugine, PDB code: 7f9r was solved by Y.Manickam, N.Malhotra, A.Sharma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.72 / 1.83
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 114.83, 73.83, 74.7, 90, 111.49, 90
R / Rfree (%) 16.6 / 19.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L95, L-Proline and Febrifugine (pdb code 7f9r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L95, L-Proline and Febrifugine, PDB code: 7f9r:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7f9r

Go back to Chlorine Binding Sites List in 7f9r
Chlorine binding site 1 out of 2 in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L95, L-Proline and Febrifugine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L95, L-Proline and Febrifugine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl903

b:87.0
occ:1.00
NH2 A:ARG654 2.8 90.6 1.0
CZ A:ARG654 3.9 89.8 1.0
NE A:ARG658 4.0 50.3 1.0
CZ2 A:TRP670 4.0 43.8 1.0
OD1 A:ASP656 4.1 45.0 1.0
NE A:ARG654 4.2 85.1 1.0
CG A:ASP656 4.2 45.2 1.0
CZ A:ARG658 4.2 56.7 1.0
NH2 A:ARG658 4.3 53.3 1.0
O A:ILE655 4.4 44.5 1.0
CA A:ASP656 4.4 38.6 1.0
CH2 A:TRP670 4.4 44.5 1.0
CB A:ASP656 4.5 40.7 1.0
CD A:ARG658 4.6 50.4 1.0
OD2 A:ASP656 4.6 41.2 1.0
CG A:ARG658 4.9 49.3 1.0
NH1 A:ARG658 4.9 60.2 1.0

Chlorine binding site 2 out of 2 in 7f9r

Go back to Chlorine Binding Sites List in 7f9r
Chlorine binding site 2 out of 2 in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L95, L-Proline and Febrifugine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L95, L-Proline and Febrifugine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl904

b:101.8
occ:1.00
O A:HOH1144 3.7 77.5 1.0
CD1 A:PHE802 4.4 58.1 1.0
CE1 A:PHE802 4.4 55.3 1.0
CG A:PHE802 4.4 51.2 1.0
CZ A:PHE802 4.4 52.2 1.0
CD2 A:PHE802 4.4 50.4 1.0
CE2 A:PHE802 4.5 50.0 1.0
CZ2 A:TRP501 4.5 54.9 1.0
CD1 A:LEU505 4.6 44.3 1.0
CD2 A:LEU505 4.9 48.8 1.0

Reference:

N.Malhotra, Y.Manickam, A.Sharma. Tgprs with Double Inhibitors To Be Published.
Page generated: Mon Jul 29 20:42:30 2024

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