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Chlorine in PDB 7fcu: X-Ray Structure of D2O-Solvent Lysozyme

Enzymatic activity of X-Ray Structure of D2O-Solvent Lysozyme

All present enzymatic activity of X-Ray Structure of D2O-Solvent Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of X-Ray Structure of D2O-Solvent Lysozyme, PDB code: 7fcu was solved by T.Chatake, I.Tanaka, K.Kusaka, S.Fujiwara, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.39 / 1.42
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.14, 79.14, 37.779, 90, 90, 90
R / Rfree (%) 16.3 / 19

Other elements in 7fcu:

The structure of X-Ray Structure of D2O-Solvent Lysozyme also contains other interesting chemical elements:

Nickel (Ni) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of D2O-Solvent Lysozyme (pdb code 7fcu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of D2O-Solvent Lysozyme, PDB code: 7fcu:

Chlorine binding site 1 out of 1 in 7fcu

Go back to Chlorine Binding Sites List in 7fcu
Chlorine binding site 1 out of 1 in the X-Ray Structure of D2O-Solvent Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of D2O-Solvent Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:24.8
occ:1.00
OH A:TYR23 2.9 17.6 1.0
O A:DOD359 3.5 26.1 1.0
O A:DOD308 3.5 25.2 0.4
CZ A:TYR23 3.6 14.3 1.0
CE2 A:TYR23 3.7 14.8 1.0
CA A:GLY104 4.3 17.0 1.0
O A:ARG21 4.7 21.1 1.0
O A:DOD308 4.8 25.7 0.6
CE1 A:TYR23 4.8 13.9 1.0
N A:GLY104 4.8 17.9 1.0
CD2 A:TYR23 4.9 15.4 1.0

Reference:

T.Chatake, I.Tanaka, K.Kusaka, S.Fujiwara. Protonation States of Hen Egg-White Lysozyme Observed Using D/H Contrast Neutron Crystallography. Acta Crystallogr D Struct V. 78 770 2022BIOL.
ISSN: ISSN 2059-7983
PubMed: 35647923
DOI: 10.1107/S2059798322004521
Page generated: Mon Jul 29 20:44:49 2024

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