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Chlorine in PDB 7fe0: Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis

Protein crystallography data

The structure of Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis, PDB code: 7fe0 was solved by B.Zhang, H.M.Ge, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.14 / 2.20
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 73.87, 73.87, 243.62, 90, 90, 90
R / Rfree (%) 18.7 / 22

Other elements in 7fe0:

The structure of Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Arsenic (As) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis (pdb code 7fe0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis, PDB code: 7fe0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7fe0

Go back to Chlorine Binding Sites List in 7fe0
Chlorine binding site 1 out of 2 in the Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:77.9
occ:1.00
O A:HOH234 2.9 45.6 1.0
OD2 B:ASP117 2.9 54.8 1.0
O B:SER135 2.9 49.5 1.0
OG B:SER84 3.1 47.0 1.0
CA B:VAL136 3.5 45.7 1.0
C B:SER135 3.9 46.7 1.0
CG B:ASP117 3.9 55.0 1.0
CB B:SER84 3.9 46.7 1.0
CG2 B:VAL136 3.9 48.7 1.0
O B:HOH320 4.0 44.9 1.0
CG2 B:ILE120 4.1 57.8 1.0
CB B:VAL136 4.1 45.0 1.0
N B:VAL136 4.1 47.0 1.0
CD1 B:LEU121 4.2 54.5 1.0
CB B:ASP117 4.2 49.0 1.0
CG B:LEU121 4.2 57.0 1.0
CB B:ILE120 4.2 58.3 1.0
CG1 B:VAL136 4.3 45.0 1.0
N B:THR137 4.4 42.3 1.0
C B:VAL136 4.5 42.1 1.0
CD1 B:ILE120 4.5 48.7 1.0
N B:LEU121 4.8 55.9 1.0
CB B:LEU121 4.9 59.4 1.0
CG1 B:ILE120 5.0 56.5 1.0

Chlorine binding site 2 out of 2 in 7fe0

Go back to Chlorine Binding Sites List in 7fe0
Chlorine binding site 2 out of 2 in the Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl202

b:86.5
occ:1.00
N C:SER169 3.0 56.6 1.0
CA C:LYS168 3.4 66.3 1.0
OG C:SER169 3.5 53.1 1.0
CD C:LYS168 3.5 81.5 1.0
C C:LYS168 3.7 60.0 1.0
CB C:SER169 3.8 51.9 1.0
CB C:LYS168 3.9 68.7 1.0
CA C:SER169 4.0 58.3 1.0
O C:ASP167 4.0 67.0 1.0
CG C:LYS168 4.4 77.5 1.0
N C:LYS168 4.5 66.6 1.0
CE C:LYS168 4.7 86.4 1.0
C C:ASP167 4.7 65.3 1.0
O C:LYS168 4.9 62.2 1.0

Reference:

H.J.Zhu, B.Zhang, S.H.Liu, L.Xiang, W.Wang, J.P.Zhu, R.H.Jiao, R.X.Tan, H.M.Ge. Avmm Catalyzes Macrocyclization in Alchivemycin A Biosynthesis To Be Published.
Page generated: Mon Jul 29 20:45:37 2024

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