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Chlorine in PDB 7fpb: Pandda Analysis Group Deposition -- AAR2/Rnaseh in Complex with Fragment P09C03 From the F2X-Universal Library

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- AAR2/Rnaseh in Complex with Fragment P09C03 From the F2X-Universal Library, PDB code: 7fpb was solved by T.Barthel, J.Wollenhaupt, G.M.A.Lima, M.C.Wahl, M.S.Weiss, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.40 / 2.02
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 89.202, 81.727, 92.837, 90, 108.32, 90
R / Rfree (%) 23.7 / 28.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pandda Analysis Group Deposition -- AAR2/Rnaseh in Complex with Fragment P09C03 From the F2X-Universal Library (pdb code 7fpb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Pandda Analysis Group Deposition -- AAR2/Rnaseh in Complex with Fragment P09C03 From the F2X-Universal Library, PDB code: 7fpb:

Chlorine binding site 1 out of 1 in 7fpb

Go back to Chlorine Binding Sites List in 7fpb
Chlorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- AAR2/Rnaseh in Complex with Fragment P09C03 From the F2X-Universal Library


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pandda Analysis Group Deposition -- AAR2/Rnaseh in Complex with Fragment P09C03 From the F2X-Universal Library within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2101

b:20.0
occ:0.32
CL A:W4L2101 0.0 20.0 0.3
C10 A:W4L2101 1.6 20.0 0.3
N2 A:W4L2101 2.5 20.0 0.3
C9 A:W4L2101 2.6 20.0 0.3
HE2 A:PHE1890 3.2 118.0 1.0
HD23 A:LEU1988 3.4 105.5 1.0
C11 A:W4L2101 3.7 20.0 0.3
HD22 A:LEU1988 3.8 105.5 1.0
C8 A:W4L2101 3.8 20.0 0.3
CD2 A:LEU1988 4.1 87.7 1.0
CE2 A:PHE1890 4.1 98.2 1.0
HZ A:PHE1890 4.2 105.4 1.0
HB3 A:LEU1988 4.3 90.7 1.0
C7 A:W4L2101 4.3 20.0 0.3
CZ A:PHE1890 4.6 87.7 1.0
HD21 A:LEU1988 4.6 105.5 1.0
HB2 A:LEU1988 4.9 90.7 1.0
CB A:LEU1988 4.9 75.4 1.0

Reference:

T.Barthel, J.Wollenhaupt, G.M.A.Lima, M.C.Wahl, M.S.Weiss. Large-Scale Crystallographic Fragment Screening Expedites Compound Optimization and Identifies Putative Protein-Protein Interaction Sites. J.Med.Chem. V. 65 14630 2022.
ISSN: ISSN 0022-2623
PubMed: 36260741
DOI: 10.1021/ACS.JMEDCHEM.2C01165
Page generated: Mon Jul 29 20:56:07 2024

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