Chlorine in PDB 7fxb: Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid
Protein crystallography data
The structure of Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid, PDB code: 7fxb
was solved by
A.Ehler,
J.Benz,
U.Obst,
R.Wain,
M.G.Rudolph,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
37.48 /
1.12
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
32.299,
53.763,
74.951,
90,
90,
90
|
R / Rfree (%)
|
13 /
16.3
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid
(pdb code 7fxb). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the
Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid, PDB code: 7fxb:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
Chlorine binding site 1 out
of 5 in 7fxb
Go back to
Chlorine Binding Sites List in 7fxb
Chlorine binding site 1 out
of 5 in the Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:16.2
occ:1.00
|
CL12
|
A:QZI203
|
0.0
|
16.2
|
1.0
|
C9
|
A:QZI203
|
1.7
|
14.8
|
1.0
|
C8
|
A:QZI203
|
2.7
|
14.6
|
1.0
|
C11
|
A:QZI203
|
2.7
|
13.1
|
1.0
|
O3
|
A:QZI203
|
3.0
|
15.0
|
1.0
|
HH21
|
A:ARG126
|
3.1
|
14.4
|
0.5
|
HH21
|
A:ARG126
|
3.1
|
14.6
|
0.5
|
CL16
|
A:QZI203
|
3.2
|
23.2
|
1.0
|
C2
|
A:QZI203
|
3.3
|
15.7
|
1.0
|
O6
|
A:QZI203
|
3.4
|
16.9
|
1.0
|
H21
|
A:QZI203
|
3.4
|
15.8
|
1.0
|
O
|
A:HOH348
|
3.5
|
14.6
|
1.0
|
C1
|
A:QZI203
|
3.5
|
15.8
|
1.0
|
HG3
|
A:PRO38
|
3.6
|
14.8
|
1.0
|
O
|
A:HOH347
|
3.6
|
21.4
|
1.0
|
NH2
|
A:ARG126
|
3.7
|
14.5
|
0.5
|
O7
|
A:QZI203
|
3.7
|
15.7
|
1.0
|
O
|
A:HOH383
|
3.7
|
15.9
|
1.0
|
NH2
|
A:ARG126
|
3.7
|
15.0
|
0.5
|
HH22
|
A:ARG126
|
3.8
|
14.3
|
0.5
|
O
|
A:HOH422
|
3.8
|
23.2
|
1.0
|
O
|
A:HOH325
|
3.8
|
18.6
|
1.0
|
C10
|
A:QZI203
|
3.9
|
15.4
|
1.0
|
HG2
|
A:PRO38
|
3.9
|
13.9
|
1.0
|
HH22
|
A:ARG126
|
4.0
|
14.4
|
0.5
|
C15
|
A:QZI203
|
4.0
|
13.1
|
1.0
|
HG
|
A:SER53
|
4.0
|
14.7
|
1.0
|
C4
|
A:QZI203
|
4.0
|
16.2
|
1.0
|
CG
|
A:PRO38
|
4.2
|
16.0
|
1.0
|
OG
|
A:SER53
|
4.2
|
15.9
|
1.0
|
O
|
A:HOH356
|
4.2
|
18.1
|
1.0
|
HH
|
A:TYR128
|
4.4
|
12.5
|
1.0
|
HZ
|
A:PHE16
|
4.5
|
11.7
|
1.0
|
C13
|
A:QZI203
|
4.5
|
15.8
|
1.0
|
HE
|
A:ARG126
|
4.5
|
14.6
|
0.5
|
H19
|
A:QZI203
|
4.6
|
16.2
|
1.0
|
CZ
|
A:ARG126
|
4.7
|
14.9
|
0.5
|
OH
|
A:TYR128
|
4.7
|
13.4
|
1.0
|
CZ
|
A:ARG126
|
4.8
|
14.2
|
0.5
|
HB2
|
A:ALA75
|
4.8
|
12.1
|
1.0
|
H20
|
A:QZI203
|
4.8
|
16.0
|
1.0
|
HE
|
A:ARG126
|
4.8
|
13.0
|
0.5
|
HB3
|
A:ALA75
|
4.9
|
12.3
|
1.0
|
NE
|
A:ARG126
|
4.9
|
15.3
|
0.5
|
HB3
|
A:PRO38
|
4.9
|
12.2
|
1.0
|
C5
|
A:QZI203
|
4.9
|
16.1
|
1.0
|
HB2
|
A:SER53
|
5.0
|
12.9
|
1.0
|
|
Chlorine binding site 2 out
of 5 in 7fxb
Go back to
Chlorine Binding Sites List in 7fxb
Chlorine binding site 2 out
of 5 in the Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:19.2
occ:1.00
|
CL14
|
A:QZI203
|
0.0
|
19.2
|
1.0
|
C10
|
A:QZI203
|
1.7
|
15.4
|
1.0
|
C13
|
A:QZI203
|
2.6
|
15.8
|
1.0
|
H19
|
A:QZI203
|
2.6
|
16.2
|
1.0
|
C8
|
A:QZI203
|
2.7
|
14.6
|
1.0
|
H22
|
A:QZI203
|
2.9
|
16.4
|
1.0
|
O3
|
A:QZI203
|
2.9
|
15.0
|
1.0
|
CL17
|
A:QZI203
|
3.0
|
20.5
|
1.0
|
O
|
A:HOH370
|
3.1
|
12.7
|
1.0
|
HE2
|
A:TYR19
|
3.2
|
7.7
|
1.0
|
O
|
A:HOH438
|
3.3
|
18.9
|
1.0
|
C4
|
A:QZI203
|
3.5
|
16.2
|
1.0
|
C1
|
A:QZI203
|
3.6
|
15.8
|
1.0
|
C5
|
A:QZI203
|
3.7
|
16.1
|
1.0
|
HD13
|
A:ILE104
|
3.7
|
12.5
|
1.0
|
HD11
|
A:ILE104
|
3.9
|
12.6
|
1.0
|
HE1
|
A:PHE16
|
3.9
|
13.8
|
1.0
|
H21
|
A:QZI203
|
3.9
|
15.8
|
1.0
|
C15
|
A:QZI203
|
3.9
|
13.1
|
1.0
|
C9
|
A:QZI203
|
4.0
|
14.8
|
1.0
|
HG
|
A:CYS117
|
4.0
|
13.3
|
1.0
|
CE2
|
A:TYR19
|
4.0
|
8.2
|
1.0
|
HH22
|
A:ARG78
|
4.1
|
10.3
|
1.0
|
CD1
|
A:ILE104
|
4.2
|
13.8
|
1.0
|
H24
|
A:QZI203
|
4.3
|
16.6
|
1.0
|
H20
|
A:QZI203
|
4.3
|
16.0
|
1.0
|
HZ
|
A:PHE16
|
4.4
|
11.7
|
1.0
|
OH
|
A:TYR19
|
4.4
|
8.9
|
1.0
|
C11
|
A:QZI203
|
4.4
|
13.1
|
1.0
|
H23
|
A:QZI203
|
4.4
|
15.2
|
1.0
|
HG12
|
A:ILE104
|
4.5
|
9.9
|
1.0
|
HH21
|
A:ARG78
|
4.6
|
10.4
|
1.0
|
NH2
|
A:ARG78
|
4.7
|
10.6
|
1.0
|
CE1
|
A:PHE16
|
4.7
|
14.9
|
1.0
|
SG
|
A:CYS117
|
4.7
|
15.4
|
1.0
|
O
|
A:HOH429
|
4.7
|
25.8
|
1.0
|
CZ
|
A:TYR19
|
4.7
|
7.6
|
1.0
|
O
|
A:HOH423
|
4.9
|
16.6
|
1.0
|
CZ
|
A:PHE16
|
4.9
|
14.2
|
1.0
|
HH
|
A:TYR19
|
4.9
|
8.5
|
1.0
|
CG1
|
A:ILE104
|
5.0
|
9.6
|
1.0
|
HB3
|
A:CYS117
|
5.0
|
8.4
|
1.0
|
HD2
|
A:TYR19
|
5.0
|
7.5
|
1.0
|
|
Chlorine binding site 3 out
of 5 in 7fxb
Go back to
Chlorine Binding Sites List in 7fxb
Chlorine binding site 3 out
of 5 in the Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:23.2
occ:1.00
|
CL16
|
A:QZI203
|
0.0
|
23.2
|
1.0
|
C11
|
A:QZI203
|
1.6
|
13.1
|
1.0
|
C15
|
A:QZI203
|
2.5
|
13.1
|
1.0
|
C9
|
A:QZI203
|
2.6
|
14.8
|
1.0
|
CL18
|
A:QZI203
|
2.9
|
19.3
|
1.0
|
O
|
A:HOH347
|
2.9
|
21.4
|
1.0
|
HD2
|
A:PHE57
|
3.0
|
14.6
|
1.0
|
HB1
|
A:ALA33
|
3.0
|
10.0
|
1.0
|
CL12
|
A:QZI203
|
3.2
|
16.2
|
1.0
|
HB3
|
A:ALA75
|
3.3
|
12.3
|
1.0
|
O
|
A:HOH422
|
3.4
|
23.2
|
1.0
|
HE2
|
A:PHE57
|
3.5
|
16.3
|
1.0
|
HB1
|
A:ALA75
|
3.5
|
11.8
|
1.0
|
CD2
|
A:PHE57
|
3.7
|
15.1
|
1.0
|
CB
|
A:ALA75
|
3.8
|
12.3
|
1.0
|
C13
|
A:QZI203
|
3.8
|
15.8
|
1.0
|
HZ
|
A:PHE16
|
3.8
|
11.7
|
1.0
|
CB
|
A:ALA33
|
3.9
|
10.4
|
1.0
|
C8
|
A:QZI203
|
3.9
|
14.6
|
1.0
|
CE2
|
A:PHE57
|
4.0
|
17.6
|
1.0
|
HB2
|
A:ALA75
|
4.0
|
12.1
|
1.0
|
HB2
|
A:ALA33
|
4.1
|
10.1
|
1.0
|
O
|
A:HOH348
|
4.1
|
14.6
|
1.0
|
HE2
|
A:PHE16
|
4.2
|
11.8
|
1.0
|
HA
|
A:ALA33
|
4.2
|
8.9
|
1.0
|
C10
|
A:QZI203
|
4.3
|
15.4
|
1.0
|
HB3
|
A:ALA33
|
4.6
|
10.2
|
1.0
|
CA
|
A:ALA33
|
4.6
|
9.7
|
1.0
|
CZ
|
A:PHE16
|
4.6
|
14.2
|
1.0
|
O
|
A:ALA33
|
4.6
|
10.5
|
1.0
|
HB3
|
A:PHE57
|
4.6
|
11.3
|
1.0
|
HG
|
A:SER55
|
4.7
|
11.1
|
0.5
|
HH22
|
A:ARG126
|
4.8
|
14.3
|
0.5
|
CE2
|
A:PHE16
|
4.8
|
13.7
|
1.0
|
CG
|
A:PHE57
|
4.9
|
11.9
|
1.0
|
HB3
|
A:ALA36
|
4.9
|
11.3
|
1.0
|
C
|
A:ALA33
|
5.0
|
9.2
|
1.0
|
H21
|
A:QZI203
|
5.0
|
15.8
|
1.0
|
HH22
|
A:ARG126
|
5.0
|
14.4
|
0.5
|
|
Chlorine binding site 4 out
of 5 in 7fxb
Go back to
Chlorine Binding Sites List in 7fxb
Chlorine binding site 4 out
of 5 in the Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:20.5
occ:1.00
|
CL17
|
A:QZI203
|
0.0
|
20.5
|
1.0
|
C13
|
A:QZI203
|
1.7
|
15.8
|
1.0
|
C15
|
A:QZI203
|
2.7
|
13.1
|
1.0
|
C10
|
A:QZI203
|
2.7
|
15.4
|
1.0
|
CL14
|
A:QZI203
|
3.0
|
19.2
|
1.0
|
CL18
|
A:QZI203
|
3.1
|
19.3
|
1.0
|
HH21
|
A:ARG78
|
3.3
|
10.4
|
1.0
|
HG2
|
A:MET20
|
3.4
|
8.5
|
1.0
|
OD1
|
A:ASP76
|
3.6
|
11.2
|
1.0
|
HE2
|
A:TYR19
|
3.6
|
7.7
|
1.0
|
HH22
|
A:ARG78
|
3.8
|
10.3
|
1.0
|
HZ
|
A:PHE16
|
3.8
|
11.7
|
1.0
|
NH2
|
A:ARG78
|
3.8
|
10.6
|
1.0
|
C11
|
A:QZI203
|
3.9
|
13.1
|
1.0
|
HG21
|
A:VAL25
|
4.0
|
9.3
|
1.0
|
HB3
|
A:ASP76
|
4.0
|
11.3
|
1.0
|
C8
|
A:QZI203
|
4.0
|
14.6
|
1.0
|
CG
|
A:ASP76
|
4.0
|
10.7
|
1.0
|
HE1
|
A:PHE16
|
4.2
|
13.8
|
1.0
|
O
|
A:HOH370
|
4.3
|
12.7
|
1.0
|
CG
|
A:MET20
|
4.3
|
8.9
|
1.0
|
CE2
|
A:TYR19
|
4.4
|
8.2
|
1.0
|
CZ
|
A:PHE16
|
4.5
|
14.2
|
1.0
|
C9
|
A:QZI203
|
4.5
|
14.8
|
1.0
|
H
|
A:ASP76
|
4.5
|
10.6
|
1.0
|
CB
|
A:ASP76
|
4.6
|
11.4
|
1.0
|
OD2
|
A:ASP76
|
4.6
|
12.8
|
1.0
|
HG11
|
A:VAL23
|
4.6
|
12.5
|
1.0
|
HG3
|
A:MET20
|
4.6
|
8.7
|
1.0
|
H19
|
A:QZI203
|
4.6
|
16.2
|
1.0
|
HB3
|
A:ALA75
|
4.7
|
12.3
|
1.0
|
CE1
|
A:PHE16
|
4.7
|
14.9
|
1.0
|
HD2
|
A:TYR19
|
4.7
|
7.5
|
1.0
|
CG2
|
A:VAL25
|
4.7
|
9.8
|
1.0
|
SD
|
A:MET20
|
4.8
|
10.0
|
1.0
|
HG23
|
A:VAL25
|
4.8
|
9.2
|
1.0
|
HA
|
A:MET20
|
4.8
|
7.4
|
1.0
|
HE
|
A:ARG78
|
4.8
|
10.3
|
1.0
|
HG21
|
A:VAL23
|
4.9
|
11.3
|
1.0
|
HG22
|
A:VAL25
|
4.9
|
9.6
|
1.0
|
HB
|
A:THR74
|
5.0
|
9.2
|
1.0
|
O
|
A:HOH438
|
5.0
|
18.9
|
1.0
|
|
Chlorine binding site 5 out
of 5 in 7fxb
Go back to
Chlorine Binding Sites List in 7fxb
Chlorine binding site 5 out
of 5 in the Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of Human FABP4 in Complex with 2-Methyl-2-(2,3,4,5, 6-Pentachlorophenoxy)Propanoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:19.3
occ:1.00
|
CL18
|
A:QZI203
|
0.0
|
19.3
|
1.0
|
C15
|
A:QZI203
|
1.7
|
13.1
|
1.0
|
C11
|
A:QZI203
|
2.6
|
13.1
|
1.0
|
C13
|
A:QZI203
|
2.7
|
15.8
|
1.0
|
CL16
|
A:QZI203
|
2.9
|
23.2
|
1.0
|
CL17
|
A:QZI203
|
3.1
|
20.5
|
1.0
|
HB3
|
A:ASP76
|
3.1
|
11.3
|
1.0
|
HB1
|
A:ALA33
|
3.1
|
10.0
|
1.0
|
HB3
|
A:ALA75
|
3.2
|
12.3
|
1.0
|
HE2
|
A:PHE57
|
3.3
|
16.3
|
1.0
|
HB2
|
A:ALA33
|
3.6
|
10.1
|
1.0
|
HZ
|
A:PHE16
|
3.7
|
11.7
|
1.0
|
CB
|
A:ALA33
|
3.7
|
10.4
|
1.0
|
HB3
|
A:ALA33
|
3.9
|
10.2
|
1.0
|
H
|
A:ASP76
|
4.0
|
10.6
|
1.0
|
C9
|
A:QZI203
|
4.0
|
14.8
|
1.0
|
C10
|
A:QZI203
|
4.0
|
15.4
|
1.0
|
SD
|
A:MET20
|
4.0
|
10.0
|
1.0
|
CB
|
A:ASP76
|
4.0
|
11.4
|
1.0
|
CB
|
A:ALA75
|
4.1
|
12.3
|
1.0
|
HB1
|
A:ALA75
|
4.1
|
11.8
|
1.0
|
CE2
|
A:PHE57
|
4.1
|
17.6
|
1.0
|
N
|
A:ASP76
|
4.1
|
10.6
|
1.0
|
HG2
|
A:MET20
|
4.3
|
8.5
|
1.0
|
OD1
|
A:ASP76
|
4.4
|
11.2
|
1.0
|
CZ
|
A:PHE16
|
4.4
|
14.2
|
1.0
|
HG21
|
A:VAL25
|
4.4
|
9.3
|
1.0
|
HG22
|
A:THR29
|
4.5
|
10.5
|
1.0
|
HD2
|
A:PHE57
|
4.5
|
14.6
|
1.0
|
C8
|
A:QZI203
|
4.5
|
14.6
|
1.0
|
HE2
|
A:PHE16
|
4.6
|
11.8
|
1.0
|
C
|
A:ALA75
|
4.6
|
11.2
|
1.0
|
CG
|
A:ASP76
|
4.6
|
10.7
|
1.0
|
CA
|
A:ASP76
|
4.6
|
11.7
|
1.0
|
HA
|
A:ASP76
|
4.6
|
11.8
|
1.0
|
HG11
|
A:VAL25
|
4.6
|
9.4
|
1.0
|
HB2
|
A:ASP76
|
4.7
|
11.7
|
1.0
|
HB2
|
A:ALA75
|
4.7
|
12.1
|
1.0
|
CD2
|
A:PHE57
|
4.7
|
15.1
|
1.0
|
CG
|
A:MET20
|
4.8
|
8.9
|
1.0
|
CA
|
A:ALA75
|
4.9
|
11.8
|
1.0
|
CE2
|
A:PHE16
|
4.9
|
13.7
|
1.0
|
HZ
|
A:PHE57
|
4.9
|
16.0
|
1.0
|
CZ
|
A:PHE57
|
5.0
|
16.9
|
1.0
|
HG23
|
A:THR29
|
5.0
|
10.0
|
1.0
|
|
Reference:
U.Obst,
C.Magnone,
B.Kuhn,
M.G.Rudolph.
Crystal Structure of A Human FABP4 Complex To Be Published.
Page generated: Mon Jul 29 21:04:41 2024
|