Chlorine in PDB 7fzd: Crystal Structure of Human FABP4 in Complex with 3-(4-Chlorophenyl)-4, 5,6,6A-Tetrahydro-3AH-Cyclopenta[D][1,2]Oxazole-5-Carboxylic Acid
Protein crystallography data
The structure of Crystal Structure of Human FABP4 in Complex with 3-(4-Chlorophenyl)-4, 5,6,6A-Tetrahydro-3AH-Cyclopenta[D][1,2]Oxazole-5-Carboxylic Acid, PDB code: 7fzd
was solved by
A.Ehler,
J.Benz,
U.Obst,
R.Canesso,
M.G.Rudolph,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
37.56 /
1.02
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
32.364,
53.865,
75.114,
90,
90,
90
|
R / Rfree (%)
|
13.3 /
16
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Human FABP4 in Complex with 3-(4-Chlorophenyl)-4, 5,6,6A-Tetrahydro-3AH-Cyclopenta[D][1,2]Oxazole-5-Carboxylic Acid
(pdb code 7fzd). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Crystal Structure of Human FABP4 in Complex with 3-(4-Chlorophenyl)-4, 5,6,6A-Tetrahydro-3AH-Cyclopenta[D][1,2]Oxazole-5-Carboxylic Acid, PDB code: 7fzd:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 7fzd
Go back to
Chlorine Binding Sites List in 7fzd
Chlorine binding site 1 out
of 2 in the Crystal Structure of Human FABP4 in Complex with 3-(4-Chlorophenyl)-4, 5,6,6A-Tetrahydro-3AH-Cyclopenta[D][1,2]Oxazole-5-Carboxylic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Human FABP4 in Complex with 3-(4-Chlorophenyl)-4, 5,6,6A-Tetrahydro-3AH-Cyclopenta[D][1,2]Oxazole-5-Carboxylic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:14.3
occ:0.50
|
CL18
|
A:WFC201
|
0.0
|
14.3
|
0.5
|
CL18
|
A:WFK204
|
0.1
|
22.8
|
0.5
|
C17
|
A:WFC201
|
1.7
|
10.0
|
0.5
|
C17
|
A:WFK204
|
1.7
|
18.8
|
0.5
|
C14
|
A:WFK204
|
2.7
|
20.2
|
0.5
|
C14
|
A:WFC201
|
2.7
|
10.9
|
0.5
|
HB3
|
A:ASP76
|
2.7
|
12.1
|
1.0
|
C13
|
A:WFC201
|
2.7
|
16.0
|
0.5
|
C13
|
A:WFK204
|
2.7
|
17.7
|
0.5
|
H29
|
A:WFK204
|
2.8
|
19.8
|
0.5
|
H29
|
A:WFC201
|
2.8
|
10.9
|
0.5
|
H28
|
A:WFC201
|
2.8
|
14.3
|
0.5
|
H28
|
A:WFK204
|
2.9
|
17.9
|
0.5
|
HG22
|
A:THR29
|
3.3
|
10.5
|
1.0
|
HB2
|
A:ALA33
|
3.3
|
9.9
|
1.0
|
HB1
|
A:ALA33
|
3.4
|
9.7
|
1.0
|
HG11
|
A:VAL25
|
3.4
|
9.4
|
1.0
|
HE2
|
A:PHE57
|
3.5
|
19.6
|
1.0
|
HG21
|
A:VAL25
|
3.5
|
9.4
|
1.0
|
HB3
|
A:ALA33
|
3.6
|
9.9
|
1.0
|
CB
|
A:ALA33
|
3.6
|
10.1
|
1.0
|
CB
|
A:ASP76
|
3.6
|
11.9
|
1.0
|
SD
|
A:MET20
|
3.7
|
10.1
|
1.0
|
HB3
|
A:ALA75
|
3.8
|
13.1
|
1.0
|
C11
|
A:WFK204
|
3.9
|
21.6
|
0.5
|
C11
|
A:WFC201
|
4.0
|
10.0
|
0.5
|
C10
|
A:WFC201
|
4.0
|
16.7
|
0.5
|
CG2
|
A:THR29
|
4.0
|
10.6
|
1.0
|
C10
|
A:WFK204
|
4.0
|
19.0
|
0.5
|
HZ
|
A:PHE57
|
4.0
|
20.0
|
1.0
|
HG23
|
A:THR29
|
4.0
|
10.0
|
1.0
|
HG2
|
A:MET20
|
4.1
|
8.5
|
1.0
|
H
|
A:ASP76
|
4.1
|
11.8
|
1.0
|
HG21
|
A:THR29
|
4.1
|
10.4
|
1.0
|
CE2
|
A:PHE57
|
4.1
|
22.1
|
1.0
|
N
|
A:ASP76
|
4.1
|
12.1
|
1.0
|
HB2
|
A:ASP76
|
4.2
|
12.2
|
1.0
|
HA
|
A:ASP76
|
4.2
|
12.7
|
1.0
|
CG
|
A:ASP76
|
4.3
|
11.2
|
1.0
|
CG1
|
A:VAL25
|
4.3
|
9.8
|
1.0
|
HG13
|
A:VAL25
|
4.3
|
9.5
|
1.0
|
CA
|
A:ASP76
|
4.3
|
12.9
|
1.0
|
OD1
|
A:ASP76
|
4.3
|
11.2
|
1.0
|
CG2
|
A:VAL25
|
4.4
|
9.6
|
1.0
|
CZ
|
A:PHE57
|
4.4
|
20.9
|
1.0
|
C05
|
A:WFK204
|
4.5
|
19.6
|
0.5
|
C05
|
A:WFC201
|
4.5
|
13.7
|
0.5
|
CG
|
A:MET20
|
4.5
|
8.7
|
1.0
|
HB1
|
A:ALA75
|
4.6
|
13.2
|
1.0
|
CB
|
A:ALA75
|
4.6
|
13.3
|
1.0
|
HG22
|
A:VAL25
|
4.6
|
9.5
|
1.0
|
HZ
|
A:PHE16
|
4.6
|
14.8
|
1.0
|
C
|
A:ALA75
|
4.6
|
12.5
|
1.0
|
H27
|
A:WFC201
|
4.7
|
11.1
|
0.5
|
H26
|
A:WFC201
|
4.7
|
14.8
|
0.5
|
H27
|
A:WFK204
|
4.8
|
20.0
|
0.5
|
H26
|
A:WFK204
|
4.8
|
18.4
|
0.5
|
HE2
|
A:PHE16
|
4.9
|
15.8
|
1.0
|
O
|
A:THR29
|
4.9
|
8.6
|
1.0
|
HG12
|
A:VAL25
|
4.9
|
9.6
|
1.0
|
HA
|
A:ARG30
|
5.0
|
8.2
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 7fzd
Go back to
Chlorine Binding Sites List in 7fzd
Chlorine binding site 2 out
of 2 in the Crystal Structure of Human FABP4 in Complex with 3-(4-Chlorophenyl)-4, 5,6,6A-Tetrahydro-3AH-Cyclopenta[D][1,2]Oxazole-5-Carboxylic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Human FABP4 in Complex with 3-(4-Chlorophenyl)-4, 5,6,6A-Tetrahydro-3AH-Cyclopenta[D][1,2]Oxazole-5-Carboxylic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl204
b:22.8
occ:0.50
|
CL18
|
A:WFK204
|
0.0
|
22.8
|
0.5
|
CL18
|
A:WFC201
|
0.1
|
14.3
|
0.5
|
C17
|
A:WFC201
|
1.7
|
10.0
|
0.5
|
C17
|
A:WFK204
|
1.7
|
18.8
|
0.5
|
C14
|
A:WFC201
|
2.7
|
10.9
|
0.5
|
C14
|
A:WFK204
|
2.7
|
20.2
|
0.5
|
HB3
|
A:ASP76
|
2.7
|
12.1
|
1.0
|
C13
|
A:WFK204
|
2.7
|
17.7
|
0.5
|
C13
|
A:WFC201
|
2.7
|
16.0
|
0.5
|
H29
|
A:WFC201
|
2.8
|
10.9
|
0.5
|
H29
|
A:WFK204
|
2.8
|
19.8
|
0.5
|
H28
|
A:WFC201
|
2.9
|
14.3
|
0.5
|
H28
|
A:WFK204
|
2.9
|
17.9
|
0.5
|
HG22
|
A:THR29
|
3.3
|
10.5
|
1.0
|
HB2
|
A:ALA33
|
3.3
|
9.9
|
1.0
|
HB1
|
A:ALA33
|
3.3
|
9.7
|
1.0
|
HE2
|
A:PHE57
|
3.5
|
19.6
|
1.0
|
HG11
|
A:VAL25
|
3.5
|
9.4
|
1.0
|
HG21
|
A:VAL25
|
3.6
|
9.4
|
1.0
|
HB3
|
A:ALA33
|
3.6
|
9.9
|
1.0
|
CB
|
A:ALA33
|
3.6
|
10.1
|
1.0
|
CB
|
A:ASP76
|
3.7
|
11.9
|
1.0
|
SD
|
A:MET20
|
3.7
|
10.1
|
1.0
|
HB3
|
A:ALA75
|
3.8
|
13.1
|
1.0
|
C11
|
A:WFC201
|
3.9
|
10.0
|
0.5
|
C11
|
A:WFK204
|
4.0
|
21.6
|
0.5
|
C10
|
A:WFK204
|
4.0
|
19.0
|
0.5
|
CG2
|
A:THR29
|
4.0
|
10.6
|
1.0
|
C10
|
A:WFC201
|
4.0
|
16.7
|
0.5
|
HZ
|
A:PHE57
|
4.0
|
20.0
|
1.0
|
HG23
|
A:THR29
|
4.0
|
10.0
|
1.0
|
H
|
A:ASP76
|
4.1
|
11.8
|
1.0
|
HG21
|
A:THR29
|
4.1
|
10.4
|
1.0
|
CE2
|
A:PHE57
|
4.1
|
22.1
|
1.0
|
HG2
|
A:MET20
|
4.1
|
8.5
|
1.0
|
N
|
A:ASP76
|
4.1
|
12.1
|
1.0
|
HB2
|
A:ASP76
|
4.2
|
12.2
|
1.0
|
HA
|
A:ASP76
|
4.2
|
12.7
|
1.0
|
CG
|
A:ASP76
|
4.3
|
11.2
|
1.0
|
CA
|
A:ASP76
|
4.3
|
12.9
|
1.0
|
CG1
|
A:VAL25
|
4.3
|
9.8
|
1.0
|
HG13
|
A:VAL25
|
4.3
|
9.5
|
1.0
|
OD1
|
A:ASP76
|
4.3
|
11.2
|
1.0
|
CZ
|
A:PHE57
|
4.4
|
20.9
|
1.0
|
CG2
|
A:VAL25
|
4.5
|
9.6
|
1.0
|
C05
|
A:WFC201
|
4.5
|
13.7
|
0.5
|
C05
|
A:WFK204
|
4.5
|
19.6
|
0.5
|
HB1
|
A:ALA75
|
4.5
|
13.2
|
1.0
|
CB
|
A:ALA75
|
4.6
|
13.3
|
1.0
|
CG
|
A:MET20
|
4.6
|
8.7
|
1.0
|
C
|
A:ALA75
|
4.6
|
12.5
|
1.0
|
HZ
|
A:PHE16
|
4.6
|
14.8
|
1.0
|
HG22
|
A:VAL25
|
4.7
|
9.5
|
1.0
|
H27
|
A:WFC201
|
4.7
|
11.1
|
0.5
|
H26
|
A:WFC201
|
4.7
|
14.8
|
0.5
|
H27
|
A:WFK204
|
4.8
|
20.0
|
0.5
|
H26
|
A:WFK204
|
4.8
|
18.4
|
0.5
|
O
|
A:THR29
|
4.9
|
8.6
|
1.0
|
HE2
|
A:PHE16
|
4.9
|
15.8
|
1.0
|
HG12
|
A:VAL25
|
5.0
|
9.6
|
1.0
|
HA
|
A:ARG30
|
5.0
|
8.2
|
1.0
|
|
Reference:
U.Obst,
C.Magnone,
B.Kuhn,
M.G.Rudolph.
Crystal Structure of A Human FABP4 Complex To Be Published.
Page generated: Mon Jul 29 21:09:59 2024
|