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Chlorine in PDB 7fzm: Crystal Structure of Human FABP4 in Complex with N-(2,4- Dichlorophenyl)-2-(2,6-Dihydroxypyrimidin-4-Yl)Acetamide

Protein crystallography data

The structure of Crystal Structure of Human FABP4 in Complex with N-(2,4- Dichlorophenyl)-2-(2,6-Dihydroxypyrimidin-4-Yl)Acetamide, PDB code: 7fzm was solved by A.Ehler, J.Benz, U.Obst, U.Obst-Sander, M.G.Rudolph, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.71 / 1.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 32.755, 53.847, 74.779, 90, 90, 90
R / Rfree (%) 16 / 18.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human FABP4 in Complex with N-(2,4- Dichlorophenyl)-2-(2,6-Dihydroxypyrimidin-4-Yl)Acetamide (pdb code 7fzm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human FABP4 in Complex with N-(2,4- Dichlorophenyl)-2-(2,6-Dihydroxypyrimidin-4-Yl)Acetamide, PDB code: 7fzm:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7fzm

Go back to Chlorine Binding Sites List in 7fzm
Chlorine binding site 1 out of 2 in the Crystal Structure of Human FABP4 in Complex with N-(2,4- Dichlorophenyl)-2-(2,6-Dihydroxypyrimidin-4-Yl)Acetamide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human FABP4 in Complex with N-(2,4- Dichlorophenyl)-2-(2,6-Dihydroxypyrimidin-4-Yl)Acetamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:28.6
occ:1.00
CL19 A:WGW203 0.0 28.6 1.0
C16 A:WGW203 1.7 25.8 1.0
C15 A:WGW203 2.7 20.2 1.0
C17 A:WGW203 2.7 33.4 1.0
CG2 A:THR29 3.4 13.5 1.0
CB A:ASP76 3.4 15.3 1.0
CE2 A:PHE57 3.5 21.2 1.0
CB A:ALA33 3.5 12.0 1.0
N A:ASP76 3.7 16.2 1.0
CZ A:PHE57 3.7 20.8 1.0
CA A:ASP76 3.8 15.3 1.0
C14 A:WGW203 3.9 19.1 1.0
C18 A:WGW203 4.0 33.0 1.0
C A:ALA75 4.0 15.1 1.0
CB A:ALA75 4.2 16.9 1.0
O A:ALA75 4.3 19.5 1.0
CG A:ASP76 4.3 14.3 1.0
OD1 A:ASP76 4.5 14.1 1.0
C13 A:WGW203 4.5 22.9 1.0
SD A:MET20 4.5 10.8 1.0
CG1 A:VAL25 4.5 11.9 1.0
CD2 A:PHE57 4.7 18.3 1.0
O A:THR29 4.8 10.6 1.0
CA A:ALA75 4.8 15.2 1.0
CB A:THR29 4.9 11.5 1.0
CE1 A:PHE57 4.9 22.4 1.0

Chlorine binding site 2 out of 2 in 7fzm

Go back to Chlorine Binding Sites List in 7fzm
Chlorine binding site 2 out of 2 in the Crystal Structure of Human FABP4 in Complex with N-(2,4- Dichlorophenyl)-2-(2,6-Dihydroxypyrimidin-4-Yl)Acetamide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human FABP4 in Complex with N-(2,4- Dichlorophenyl)-2-(2,6-Dihydroxypyrimidin-4-Yl)Acetamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:24.8
occ:1.00
CL20 A:WGW203 0.0 24.8 1.0
C14 A:WGW203 1.7 19.1 1.0
C15 A:WGW203 2.6 20.2 1.0
C13 A:WGW203 2.7 22.9 1.0
N12 A:WGW203 2.9 22.2 1.0
NH2 A:ARG78 3.5 13.3 1.0
CE2 A:TYR19 3.6 9.4 1.0
O A:HOH376 3.6 17.8 1.0
C16 A:WGW203 3.9 25.8 1.0
C18 A:WGW203 4.0 33.0 1.0
CG A:MET20 4.1 9.2 1.0
OD1 A:ASP76 4.2 14.1 1.0
C10 A:WGW203 4.2 22.6 1.0
CG2 A:VAL25 4.3 11.7 1.0
CD2 A:TYR19 4.3 9.3 1.0
CG1 A:VAL23 4.3 13.3 1.0
C17 A:WGW203 4.4 33.4 1.0
CZ A:TYR19 4.5 9.0 1.0
CG2 A:VAL23 4.5 12.0 1.0
OH A:TYR19 4.5 10.2 1.0
CG A:ASP76 4.5 14.3 1.0
CZ A:ARG78 4.6 13.5 1.0
CB A:VAL23 4.6 11.5 1.0
OD2 A:ASP76 4.7 15.7 1.0
CA A:MET20 4.9 8.8 1.0
SD A:MET20 4.9 10.8 1.0
CE1 A:PHE16 4.9 12.8 1.0
C9 A:WGW203 4.9 19.6 1.0
CZ A:PHE16 4.9 13.1 1.0
CB A:MET20 4.9 8.7 1.0

Reference:

U.Obst, C.Magnone, B.Kuhn, M.G.Rudolph. Crystal Structure of A Human FABP4 Complex To Be Published.
Page generated: Mon Jul 29 21:10:56 2024

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