Chlorine in PDB 7fzv: Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One
Protein crystallography data
The structure of Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One, PDB code: 7fzv
was solved by
A.Ehler,
J.Benz,
U.Obst,
M.Brunner,
M.G.Rudolph,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
45.83 /
2.55
|
Space group
|
P 4 3 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
137.496,
137.496,
137.496,
90,
90,
90
|
R / Rfree (%)
|
19.5 /
25.2
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One
(pdb code 7fzv). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One, PDB code: 7fzv:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 7fzv
Go back to
Chlorine Binding Sites List in 7fzv
Chlorine binding site 1 out
of 4 in the Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One
![](/pictures/CL/pdb/fz/7fzv-CL-sphere_01.jpg) Mono view
![](/pictures/CL/pdb/fz/7fzv-CL-sphere_01_stereo.jpg) Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:145.7
occ:1.00
|
CL17
|
A:O1L203
|
0.0
|
145.7
|
1.0
|
C9
|
A:O1L203
|
1.7
|
99.6
|
1.0
|
C7
|
A:O1L203
|
2.7
|
83.7
|
1.0
|
C10
|
A:O1L203
|
2.8
|
96.8
|
1.0
|
C8
|
A:O1L203
|
3.0
|
69.9
|
1.0
|
NH2
|
A:ARG78
|
3.2
|
94.7
|
1.0
|
NH1
|
A:ARG78
|
3.5
|
84.6
|
1.0
|
OE1
|
A:GLN95
|
3.7
|
57.2
|
1.0
|
CZ
|
A:ARG78
|
3.8
|
92.6
|
1.0
|
C13
|
A:O1L203
|
4.0
|
100.9
|
1.0
|
C16
|
A:O1L203
|
4.1
|
106.1
|
1.0
|
OH
|
A:TYR19
|
4.3
|
59.1
|
1.0
|
OD1
|
A:ASP76
|
4.3
|
78.4
|
1.0
|
N3
|
A:O1L203
|
4.4
|
74.9
|
1.0
|
CE2
|
A:TYR19
|
4.4
|
54.2
|
1.0
|
CG1
|
A:VAL23
|
4.5
|
66.7
|
1.0
|
CB
|
A:THR74
|
4.5
|
63.7
|
1.0
|
C19
|
A:O1L203
|
4.5
|
101.1
|
1.0
|
O11
|
A:O1L203
|
4.6
|
94.7
|
1.0
|
CD
|
A:GLN95
|
4.6
|
57.5
|
1.0
|
NE2
|
A:GLN95
|
4.7
|
60.9
|
1.0
|
CG2
|
A:THR74
|
4.8
|
65.4
|
1.0
|
CZ
|
A:TYR19
|
4.9
|
54.4
|
1.0
|
OG1
|
A:THR74
|
4.9
|
63.1
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 7fzv
Go back to
Chlorine Binding Sites List in 7fzv
Chlorine binding site 2 out
of 4 in the Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One
![](/pictures/CL/pdb/fz/7fzv-CL-sphere_02.jpg) Mono view
![](/pictures/CL/pdb/fz/7fzv-CL-sphere_02_stereo.jpg) Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:102.3
occ:1.00
|
CL20
|
A:O1L203
|
0.0
|
102.3
|
1.0
|
C16
|
A:O1L203
|
1.8
|
106.1
|
1.0
|
C19
|
A:O1L203
|
2.8
|
101.1
|
1.0
|
C10
|
A:O1L203
|
2.8
|
96.8
|
1.0
|
SD
|
A:MET20
|
3.5
|
52.5
|
1.0
|
CB
|
A:ASP76
|
4.0
|
78.1
|
1.0
|
CG
|
A:MET20
|
4.0
|
51.8
|
1.0
|
N
|
A:ASP76
|
4.0
|
64.7
|
1.0
|
C13
|
A:O1L203
|
4.1
|
100.9
|
1.0
|
CB
|
A:ALA75
|
4.1
|
63.5
|
1.0
|
C9
|
A:O1L203
|
4.1
|
99.6
|
1.0
|
OD1
|
A:ASP76
|
4.2
|
78.4
|
1.0
|
CB
|
A:ALA33
|
4.2
|
52.8
|
1.0
|
CG2
|
A:VAL25
|
4.3
|
50.9
|
1.0
|
CG
|
A:ASP76
|
4.3
|
80.8
|
1.0
|
C
|
A:ALA75
|
4.4
|
64.3
|
1.0
|
CA
|
A:ASP76
|
4.4
|
71.7
|
1.0
|
CG1
|
A:VAL25
|
4.5
|
49.8
|
1.0
|
C7
|
A:O1L203
|
4.6
|
83.7
|
1.0
|
CA
|
A:ALA75
|
4.8
|
64.4
|
1.0
|
O
|
A:ALA75
|
4.9
|
66.5
|
1.0
|
CB
|
A:VAL25
|
5.0
|
52.9
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 7fzv
Go back to
Chlorine Binding Sites List in 7fzv
Chlorine binding site 3 out
of 4 in the Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One
![](/pictures/CL/pdb/fz/7fzv-CL-sphere_03.jpg) Mono view
![](/pictures/CL/pdb/fz/7fzv-CL-sphere_03_stereo.jpg) Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl205
b:134.5
occ:1.00
|
CL17
|
B:O1L205
|
0.0
|
134.5
|
1.0
|
C9
|
B:O1L205
|
1.7
|
109.6
|
1.0
|
C10
|
B:O1L205
|
2.6
|
115.5
|
1.0
|
C7
|
B:O1L205
|
2.7
|
108.3
|
1.0
|
C8
|
B:O1L205
|
3.1
|
101.3
|
1.0
|
CE2
|
B:TYR19
|
3.2
|
55.9
|
1.0
|
NH2
|
B:ARG78
|
3.8
|
67.7
|
1.0
|
C16
|
B:O1L205
|
3.9
|
137.8
|
1.0
|
C13
|
B:O1L205
|
3.9
|
124.6
|
1.0
|
OH
|
B:TYR19
|
3.9
|
56.2
|
1.0
|
CZ
|
B:TYR19
|
4.0
|
61.5
|
1.0
|
CD2
|
B:TYR19
|
4.2
|
57.0
|
1.0
|
N3
|
B:O1L205
|
4.2
|
101.0
|
1.0
|
C6
|
B:O1L205
|
4.3
|
90.3
|
1.0
|
C19
|
B:O1L205
|
4.4
|
148.0
|
1.0
|
OD1
|
B:ASP76
|
4.8
|
76.1
|
1.0
|
CZ
|
B:ARG78
|
4.9
|
68.2
|
1.0
|
CD1
|
B:ILE104
|
4.9
|
60.1
|
1.0
|
CE1
|
B:PHE16
|
5.0
|
61.3
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 7fzv
Go back to
Chlorine Binding Sites List in 7fzv
Chlorine binding site 4 out
of 4 in the Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One
![](/pictures/CL/pdb/fz/7fzv-CL-sphere_04.jpg) Mono view
![](/pictures/CL/pdb/fz/7fzv-CL-sphere_04_stereo.jpg) Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Human FABP4 in Complex with 1-[(2,4- Dichlorophenyl)Methyl]-4-Hydroxy-3-[(E)-3-Phenylprop-2-Enyl]Pyridin- 2-One within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl205
b:125.3
occ:1.00
|
CL20
|
B:O1L205
|
0.0
|
125.3
|
1.0
|
C16
|
B:O1L205
|
1.7
|
137.8
|
1.0
|
C10
|
B:O1L205
|
2.7
|
115.5
|
1.0
|
C19
|
B:O1L205
|
2.7
|
148.0
|
1.0
|
CB
|
B:ALA75
|
3.8
|
67.4
|
1.0
|
C9
|
B:O1L205
|
3.9
|
109.6
|
1.0
|
C13
|
B:O1L205
|
4.0
|
124.6
|
1.0
|
CB
|
B:ASP76
|
4.0
|
64.3
|
1.0
|
SD
|
B:MET20
|
4.2
|
64.0
|
1.0
|
N
|
B:ASP76
|
4.2
|
66.4
|
1.0
|
CB
|
B:ALA33
|
4.2
|
62.5
|
1.0
|
OD1
|
B:ASP76
|
4.3
|
76.1
|
1.0
|
C
|
B:ALA75
|
4.4
|
65.6
|
1.0
|
CG2
|
B:THR29
|
4.5
|
60.4
|
1.0
|
CG
|
B:ASP76
|
4.5
|
69.4
|
1.0
|
C7
|
B:O1L205
|
4.5
|
108.3
|
1.0
|
CA
|
B:ASP76
|
4.6
|
61.1
|
1.0
|
CA
|
B:ALA75
|
4.7
|
66.2
|
1.0
|
O
|
B:ALA75
|
4.9
|
63.2
|
1.0
|
CG1
|
B:VAL25
|
5.0
|
64.9
|
1.0
|
CE2
|
B:PHE57
|
5.0
|
83.3
|
1.0
|
|
Reference:
U.Obst,
C.Magnone,
B.Kuhn,
M.G.Rudolph.
Crystal Structure of A Human FABP4 Complex To Be Published.
Page generated: Mon Jul 29 21:10:56 2024
|