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Chlorine in PDB 7gur: Crystal Structure of B-Cell Lymphoma 6 Protein Btb Domain in Complex with Ligand 1 at 22.65 Mgy X-Ray Dose.

Protein crystallography data

The structure of Crystal Structure of B-Cell Lymphoma 6 Protein Btb Domain in Complex with Ligand 1 at 22.65 Mgy X-Ray Dose., PDB code: 7gur was solved by M.J.Rodrigues, Y.V.Le Bihan, R.L.M.Van Montfort, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.90 / 1.80
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 67.63, 67.63, 166.27, 90, 90, 120
R / Rfree (%) 18.1 / 21.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of B-Cell Lymphoma 6 Protein Btb Domain in Complex with Ligand 1 at 22.65 Mgy X-Ray Dose. (pdb code 7gur). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of B-Cell Lymphoma 6 Protein Btb Domain in Complex with Ligand 1 at 22.65 Mgy X-Ray Dose., PDB code: 7gur:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7gur

Go back to Chlorine Binding Sites List in 7gur
Chlorine binding site 1 out of 2 in the Crystal Structure of B-Cell Lymphoma 6 Protein Btb Domain in Complex with Ligand 1 at 22.65 Mgy X-Ray Dose.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of B-Cell Lymphoma 6 Protein Btb Domain in Complex with Ligand 1 at 22.65 Mgy X-Ray Dose. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:30.8
occ:0.99
CL1 A:7ZO201 0.0 30.8 1.0
C9 A:7ZO201 1.7 30.9 1.0
C4 A:7ZO201 2.7 32.5 1.0
C10 A:7ZO201 2.7 31.0 1.0
N16 A:7ZO201 3.1 28.9 1.0
O A:MET51 3.3 28.7 1.0
C A:MET51 3.4 28.7 1.0
N A:ALA52 3.6 25.9 1.0
CA A:ALA52 3.6 25.9 1.0
CD1 A:TYR58 3.6 35.4 1.0
CB A:MET51 3.8 26.2 1.0
N13 A:7ZO201 4.0 34.6 1.0
N14 A:7ZO201 4.0 33.9 1.0
CE1 A:TYR58 4.1 38.4 1.0
CA A:MET51 4.3 24.3 1.0
C5 A:7ZO201 4.4 34.6 1.0
C8 A:7ZO201 4.4 30.0 1.0
CB A:ALA52 4.5 26.3 1.0
CG A:TYR58 4.6 33.9 1.0
C A:ALA52 4.7 28.2 1.0
CB A:TYR58 4.9 30.6 1.0

Chlorine binding site 2 out of 2 in 7gur

Go back to Chlorine Binding Sites List in 7gur
Chlorine binding site 2 out of 2 in the Crystal Structure of B-Cell Lymphoma 6 Protein Btb Domain in Complex with Ligand 1 at 22.65 Mgy X-Ray Dose.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of B-Cell Lymphoma 6 Protein Btb Domain in Complex with Ligand 1 at 22.65 Mgy X-Ray Dose. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:39.8
occ:1.00
O A:HOH332 2.9 57.1 1.0
O A:HOH346 3.2 36.1 1.0
N A:HIS116 3.4 33.4 1.0
CB A:HIS116 3.5 36.1 1.0
N A:VAL117 3.5 30.7 1.0
C A:MET114 3.6 33.9 1.0
CB A:MET114 3.8 28.3 1.0
CG2 A:VAL117 3.8 31.0 1.0
CA A:MET114 3.8 27.4 1.0
CA A:HIS116 3.8 34.9 1.0
O A:MET114 3.9 32.6 1.0
CE2 A:PHE89 4.0 30.7 1.0
N A:GLU115 4.1 34.3 1.0
C A:HIS116 4.1 36.7 1.0
CG A:HIS116 4.3 40.7 1.0
CD2 A:HIS116 4.3 42.2 1.0
CB A:VAL117 4.4 32.2 1.0
C A:GLU115 4.5 38.1 1.0
CZ A:PHE89 4.5 29.5 1.0
CA A:VAL117 4.5 30.1 1.0
CE A:MET114 4.6 29.8 1.0
CG A:MET114 4.7 30.2 1.0
O A:CYS53 4.7 28.0 1.0
CA A:GLU115 4.8 36.7 1.0
O17 A:7ZO201 4.8 38.8 1.0

Reference:

M.J.Rodrigues, M.Cabry, G.Collie, M.Carter, C.Mcandrew, R.L.Owen, B.R.Bellenie, Y.V.Le Bihan, R.L.M.Van Montfort. Specific Radiation Damage to Halogenated Inhibitors and Ligands in Protein-Ligand Crystal Structures. J.Appl.Crystallogr. V. 57 1951 2024.
ISSN: ISSN 0021-8898
PubMed: 39628887
DOI: 10.1107/S1600576724010549
Page generated: Sun Jul 13 02:08:14 2025

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