Chlorine in PDB 7l47: The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Enzymatic activity of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
All present enzymatic activity of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site:
4.2.1.20;
Protein crystallography data
The structure of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site, PDB code: 7l47
was solved by
E.Hilario,
M.F.Dunn,
L.J.Mueller,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
38.94 /
1.55
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
181.979,
59.33,
67.07,
90,
94.34,
90
|
R / Rfree (%)
|
18.8 /
21.2
|
Other elements in 7l47:
The structure of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site also contains other interesting chemical elements:
Chlorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
11;
Binding sites:
The binding sites of Chlorine atom in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
(pdb code 7l47). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 11 binding sites of Chlorine where determined in the
The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site, PDB code: 7l47:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Chlorine binding site 1 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 1 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl421
b:45.3
occ:1.00
|
O
|
B:HOH690
|
3.3
|
19.8
|
1.0
|
NH1
|
B:ARG379
|
3.5
|
26.4
|
1.0
|
O
|
B:HOH861
|
3.5
|
45.3
|
1.0
|
O
|
B:GLY83
|
3.6
|
16.9
|
1.0
|
CZ
|
B:ARG379
|
3.9
|
25.9
|
1.0
|
O
|
B:HOH652
|
3.9
|
27.6
|
1.0
|
NE
|
B:ARG379
|
4.0
|
23.6
|
1.0
|
CA
|
B:GLY84
|
4.4
|
15.5
|
1.0
|
CG
|
B:ARG379
|
4.6
|
19.2
|
1.0
|
C
|
B:GLY83
|
4.6
|
15.9
|
1.0
|
CD
|
B:LYS382
|
4.7
|
22.6
|
1.0
|
NH2
|
B:ARG379
|
4.8
|
29.5
|
1.0
|
O
|
B:HOH511
|
4.8
|
24.5
|
1.0
|
O
|
B:GLY84
|
4.8
|
15.5
|
1.0
|
C
|
B:GLY84
|
4.8
|
14.9
|
1.0
|
O
|
B:ARG379
|
4.9
|
15.3
|
1.0
|
CB
|
B:LYS382
|
5.0
|
21.7
|
1.0
|
N
|
B:GLY84
|
5.0
|
15.1
|
1.0
|
|
Chlorine binding site 2 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 2 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl422
b:50.5
occ:1.00
|
O
|
B:ARG150
|
3.8
|
18.0
|
1.0
|
C
|
B:ARG150
|
3.9
|
18.3
|
1.0
|
N
|
B:LEU151
|
4.0
|
18.3
|
1.0
|
CA
|
B:LEU151
|
4.1
|
18.1
|
1.0
|
CB
|
B:ARG150
|
4.2
|
20.5
|
1.0
|
CE1
|
B:PHE147
|
4.3
|
26.4
|
1.0
|
CD2
|
B:LEU151
|
4.4
|
19.9
|
1.0
|
CA
|
B:ARG150
|
4.6
|
19.3
|
1.0
|
CG
|
B:LEU151
|
4.7
|
19.1
|
1.0
|
CD1
|
B:PHE147
|
4.9
|
24.5
|
1.0
|
CB
|
B:LEU151
|
5.0
|
18.1
|
1.0
|
|
Chlorine binding site 3 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 3 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl423
b:56.7
occ:1.00
|
CA
|
B:ASP176
|
3.7
|
22.8
|
1.0
|
N
|
B:ASP176
|
3.9
|
22.8
|
1.0
|
CB
|
B:ASP176
|
3.9
|
22.9
|
1.0
|
NH1
|
B:ARG175
|
3.9
|
39.5
|
1.0
|
CZ
|
B:ARG175
|
3.9
|
40.2
|
1.0
|
NH2
|
B:ARG175
|
4.2
|
41.3
|
1.0
|
OH
|
B:TYR133
|
4.3
|
23.1
|
1.0
|
O
|
B:GLU172
|
4.4
|
24.2
|
1.0
|
NE
|
B:ARG175
|
4.4
|
37.4
|
1.0
|
C
|
B:ARG175
|
4.4
|
24.6
|
1.0
|
CG
|
B:ARG175
|
4.5
|
32.0
|
1.0
|
CG
|
B:ASP176
|
4.5
|
23.5
|
1.0
|
CB
|
B:ARG175
|
4.6
|
28.0
|
1.0
|
OE1
|
B:GLU172
|
4.7
|
37.5
|
1.0
|
O
|
B:ARG175
|
4.8
|
25.1
|
1.0
|
O
|
B:HOH709
|
4.8
|
34.9
|
1.0
|
OD2
|
B:ASP176
|
4.9
|
23.5
|
1.0
|
|
Chlorine binding site 4 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 4 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl424
b:72.2
occ:1.00
|
O
|
B:HOH873
|
3.9
|
46.3
|
1.0
|
O
|
B:HOH543
|
4.6
|
23.1
|
1.0
|
O
|
B:HOH941
|
4.7
|
28.6
|
1.0
|
O
|
B:HOH839
|
4.7
|
21.9
|
1.0
|
O
|
B:HOH955
|
4.9
|
40.0
|
1.0
|
O
|
B:HOH875
|
4.9
|
30.0
|
1.0
|
O
|
B:HOH865
|
4.9
|
46.2
|
1.0
|
O
|
B:HOH933
|
4.9
|
25.9
|
1.0
|
O
|
B:HOH643
|
5.0
|
19.2
|
1.0
|
O
|
B:HOH911
|
5.0
|
46.0
|
1.0
|
O
|
B:HOH959
|
5.0
|
41.1
|
1.0
|
|
Chlorine binding site 5 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 5 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl425
b:58.4
occ:1.00
|
O
|
B:HOH565
|
3.2
|
30.0
|
1.0
|
O
|
B:HOH863
|
3.2
|
42.0
|
1.0
|
OD1
|
B:ASP291
|
3.2
|
27.2
|
1.0
|
CG
|
B:ASP291
|
3.5
|
26.1
|
1.0
|
O
|
B:HOH674
|
3.5
|
28.6
|
1.0
|
N
|
B:ASP291
|
3.7
|
23.3
|
1.0
|
OD2
|
B:ASP291
|
3.8
|
26.6
|
1.0
|
N
|
B:ALA290
|
3.9
|
22.0
|
1.0
|
CB
|
B:ALA290
|
4.1
|
23.6
|
1.0
|
CB
|
B:ASP291
|
4.1
|
24.9
|
1.0
|
CB
|
B:THR289
|
4.1
|
23.2
|
1.0
|
OG1
|
B:THR289
|
4.2
|
22.6
|
1.0
|
O
|
B:HOH818
|
4.3
|
50.7
|
1.0
|
CA
|
B:ALA290
|
4.4
|
23.0
|
1.0
|
C
|
B:ALA290
|
4.5
|
23.6
|
1.0
|
CA
|
B:ASP291
|
4.5
|
23.2
|
1.0
|
C
|
B:THR289
|
4.7
|
21.9
|
1.0
|
CA
|
B:THR289
|
5.0
|
22.1
|
1.0
|
CG2
|
B:THR289
|
5.0
|
23.2
|
1.0
|
|
Chlorine binding site 6 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 6 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl426
b:52.9
occ:1.00
|
O
|
B:HOH724
|
2.8
|
19.2
|
1.0
|
O
|
B:HOH755
|
3.0
|
44.8
|
1.0
|
O
|
B:HOH864
|
3.1
|
44.7
|
1.0
|
CD2
|
B:PHE9
|
3.6
|
16.7
|
1.0
|
CE2
|
B:TYR315
|
3.8
|
18.1
|
1.0
|
O
|
B:HOH942
|
4.1
|
34.0
|
1.0
|
CD2
|
B:TYR315
|
4.2
|
16.6
|
1.0
|
CE2
|
B:PHE9
|
4.2
|
16.2
|
1.0
|
O
|
B:HOH894
|
4.4
|
49.0
|
1.0
|
NE2
|
B:GLN312
|
4.5
|
14.9
|
1.0
|
CZ
|
B:TYR315
|
4.7
|
18.6
|
1.0
|
CG
|
B:PHE9
|
4.7
|
16.3
|
1.0
|
CB
|
B:PHE9
|
4.8
|
16.1
|
1.0
|
O
|
B:HOH540
|
4.9
|
28.1
|
1.0
|
O
|
B:HOH731
|
4.9
|
30.0
|
1.0
|
CA
|
B:PHE9
|
5.0
|
16.6
|
1.0
|
|
Chlorine binding site 7 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 7 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl427
b:61.9
occ:1.00
|
O
|
B:SER143
|
4.2
|
29.0
|
1.0
|
CA
|
B:PRO144
|
4.2
|
29.7
|
1.0
|
N
|
B:PRO144
|
4.3
|
30.4
|
1.0
|
C
|
B:SER143
|
4.3
|
30.7
|
1.0
|
CB
|
B:SER143
|
4.3
|
32.3
|
1.0
|
CB
|
B:PHE147
|
4.4
|
22.7
|
1.0
|
CG
|
B:PRO144
|
4.7
|
31.6
|
1.0
|
CD2
|
B:PHE147
|
4.7
|
25.5
|
1.0
|
CD
|
B:PRO144
|
4.7
|
31.9
|
1.0
|
CG
|
B:PHE147
|
4.8
|
24.4
|
1.0
|
CB
|
B:PRO144
|
4.9
|
30.5
|
1.0
|
CA
|
B:SER143
|
5.0
|
29.9
|
1.0
|
|
Chlorine binding site 8 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 8 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl428
b:68.5
occ:1.00
|
O
|
B:HOH924
|
3.7
|
47.1
|
1.0
|
O
|
B:HOH560
|
4.0
|
27.8
|
1.0
|
CG
|
B:TYR8
|
4.1
|
19.3
|
1.0
|
CD2
|
B:TYR8
|
4.1
|
20.2
|
1.0
|
CD1
|
B:TYR8
|
4.2
|
19.8
|
1.0
|
CE2
|
B:TYR8
|
4.2
|
20.4
|
1.0
|
CE1
|
B:TYR8
|
4.3
|
20.1
|
1.0
|
CZ
|
B:TYR8
|
4.3
|
20.9
|
1.0
|
O
|
B:GLY10
|
4.4
|
20.0
|
1.0
|
O
|
B:HOH552
|
4.4
|
32.9
|
1.0
|
CB
|
B:TYR8
|
4.7
|
18.2
|
1.0
|
O
|
B:HOH901
|
4.7
|
41.3
|
1.0
|
O
|
B:HOH642
|
4.8
|
53.2
|
1.0
|
|
Chlorine binding site 9 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 9 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 9 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl429
b:52.5
occ:1.00
|
O
|
B:HOH555
|
3.5
|
45.5
|
1.0
|
O
|
B:LEU4
|
3.6
|
23.2
|
1.0
|
C
|
B:LEU5
|
3.6
|
20.8
|
1.0
|
N
|
B:ASN6
|
3.8
|
21.0
|
1.0
|
O
|
B:LEU5
|
3.8
|
21.3
|
1.0
|
C
|
B:LEU4
|
3.8
|
21.9
|
1.0
|
O
|
B:THR3
|
3.9
|
22.6
|
1.0
|
CA
|
B:LEU5
|
3.9
|
20.4
|
1.0
|
N
|
B:LEU5
|
4.0
|
20.9
|
1.0
|
CA
|
B:ASN6
|
4.2
|
20.7
|
1.0
|
OG1
|
B:THR3
|
4.4
|
23.9
|
1.0
|
C
|
B:THR3
|
4.6
|
23.7
|
1.0
|
CA
|
B:LEU4
|
4.8
|
21.5
|
1.0
|
CB
|
B:ASN6
|
4.9
|
22.2
|
1.0
|
O
|
B:HOH767
|
4.9
|
40.0
|
1.0
|
O
|
B:HOH641
|
5.0
|
32.6
|
1.0
|
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Chlorine binding site 10 out
of 11 in 7l47
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Chlorine Binding Sites List in 7l47
Chlorine binding site 10 out
of 11 in the The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site
Mono view
Stereo pair view
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A full contact list of Chlorine with other atoms in the Cl binding
site number 10 of The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl430
b:54.0
occ:1.00
|
O
|
B:GLY127
|
3.9
|
22.3
|
1.0
|
O
|
B:LEU128
|
4.0
|
17.8
|
1.0
|
C
|
B:LEU128
|
4.0
|
18.8
|
1.0
|
N
|
B:LYS129
|
4.1
|
19.0
|
1.0
|
CA
|
B:LYS129
|
4.2
|
20.7
|
1.0
|
C
|
B:GLY127
|
4.2
|
20.7
|
1.0
|
O
|
B:HOH673
|
4.5
|
23.3
|
1.0
|
O
|
B:HOH590
|
4.5
|
19.2
|
1.0
|
CB
|
B:LYS129
|
4.5
|
24.0
|
1.0
|
N
|
B:LEU128
|
4.6
|
18.3
|
1.0
|
O
|
B:HOH557
|
4.6
|
20.6
|
1.0
|
CA
|
B:LEU128
|
4.7
|
18.3
|
1.0
|
CA
|
B:GLY127
|
4.8
|
20.1
|
1.0
|
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Reference:
E.Hilario,
M.F.Dunn,
L.J.Mueller.
The Internal Aldimine Form of the Beta-K167T Mutant Tryptophan Synthase From Salmonella at 1.55 Angstrom Resolution with Cesium Ion at the Metal Coordination Site. To Be Published.
Page generated: Mon Jul 29 23:52:16 2024
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