Atomistry » Chlorine » PDB 7l9j-7lgp » 7lde
Atomistry »
  Chlorine »
    PDB 7l9j-7lgp »
      7lde »

Chlorine in PDB 7lde: Native Ampa Receptor

Other elements in 7lde:

The structure of Native Ampa Receptor also contains other interesting chemical elements:

Fluorine (F) 18 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Native Ampa Receptor (pdb code 7lde). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Native Ampa Receptor, PDB code: 7lde:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7lde

Go back to Chlorine Binding Sites List in 7lde
Chlorine binding site 1 out of 2 in the Native Ampa Receptor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Native Ampa Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cl504

b:85.8
occ:1.00
CL1 G:XVD504 0.0 85.8 1.0
C1 G:XVD504 1.8 85.8 1.0
C2 G:XVD504 2.8 85.8 1.0
C6 G:XVD504 2.8 85.8 1.0
C7 G:XVD504 3.1 85.8 1.0
CA G:GLY209 3.4 88.4 1.0
CZ A:PHE527 3.4 66.6 1.0
C12 G:XVD504 3.6 85.8 1.0
C8 G:XVD504 3.8 85.8 1.0
CE2 A:PHE527 3.9 66.6 1.0
C3 G:XVD504 4.1 85.8 1.0
C5 G:XVD504 4.1 85.8 1.0
C G:GLY209 4.2 88.4 1.0
N G:GLY209 4.3 88.4 1.0
CE1 A:PHE527 4.4 66.6 1.0
O G:TYR206 4.5 98.4 1.0
C11 G:XVD504 4.6 85.8 1.0
C4 G:XVD504 4.6 85.8 1.0
CD1 G:TYR206 4.6 98.4 1.0
O G:GLY209 4.7 88.4 1.0
C9 G:XVD504 4.8 85.8 1.0
CA G:TYR206 4.9 98.4 1.0
N G:LEU210 4.9 86.2 1.0

Chlorine binding site 2 out of 2 in 7lde

Go back to Chlorine Binding Sites List in 7lde
Chlorine binding site 2 out of 2 in the Native Ampa Receptor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Native Ampa Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl504

b:85.2
occ:1.00
CL1 H:XVD504 0.0 85.2 1.0
C1 H:XVD504 1.8 85.2 1.0
C2 H:XVD504 2.8 85.2 1.0
C6 H:XVD504 2.8 85.2 1.0
C7 H:XVD504 3.1 85.2 1.0
CA H:GLY209 3.4 87.3 1.0
CZ C:PHE527 3.6 64.2 1.0
C12 H:XVD504 3.6 85.2 1.0
C8 H:XVD504 3.8 85.2 1.0
CE2 C:PHE527 4.0 64.2 1.0
C3 H:XVD504 4.1 85.2 1.0
C5 H:XVD504 4.1 85.2 1.0
C H:GLY209 4.2 87.3 1.0
N H:GLY209 4.3 87.3 1.0
O H:TYR206 4.5 96.8 1.0
C11 H:XVD504 4.6 85.2 1.0
CE1 C:PHE527 4.6 64.2 1.0
C4 H:XVD504 4.6 85.2 1.0
CD1 H:TYR206 4.6 96.8 1.0
O H:GLY209 4.7 87.3 1.0
C9 H:XVD504 4.8 85.2 1.0
CA H:TYR206 4.9 96.8 1.0
N H:LEU210 4.9 86.8 1.0

Reference:

J.Yu, P.Rao, S.Clark, J.Mitra, T.Ha, E.Gouaux. Hippocampal Ampa Receptor Assemblies and Mechanism of Allosteric Inhibition Nature 2021.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-021-03540-0
Page generated: Sun Jul 13 03:41:32 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy