Chlorine in PDB 7n18: Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid
Protein crystallography data
The structure of Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid, PDB code: 7n18
was solved by
N.R.Silvaggi,
K.N.Allen,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
31.91 /
2.03
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
72.99,
67.292,
97.487,
90,
105.15,
90
|
R / Rfree (%)
|
15.8 /
19.6
|
Other elements in 7n18:
The structure of Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid
(pdb code 7n18). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid, PDB code: 7n18:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 7n18
Go back to
Chlorine Binding Sites List in 7n18
Chlorine binding site 1 out
of 2 in the Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl502
b:50.0
occ:0.92
|
CL4
|
B:C7I502
|
0.0
|
50.0
|
0.9
|
CL4
|
B:C8I503
|
0.5
|
50.3
|
0.1
|
C4
|
B:C8I503
|
1.3
|
45.6
|
0.1
|
C4
|
B:C7I502
|
1.8
|
45.8
|
0.9
|
C3
|
B:C8I503
|
2.2
|
43.0
|
0.1
|
C5
|
B:C8I503
|
2.5
|
44.3
|
0.1
|
C3
|
B:C7I502
|
2.7
|
42.5
|
0.9
|
C5
|
B:C7I502
|
2.9
|
43.9
|
0.9
|
HB3
|
B:PHE194
|
3.2
|
38.6
|
1.0
|
HB2
|
B:PHE194
|
3.4
|
38.6
|
1.0
|
CG
|
B:PHE194
|
3.5
|
30.1
|
1.0
|
CB
|
B:PHE194
|
3.5
|
32.2
|
1.0
|
HE2
|
B:PHE369
|
3.6
|
68.1
|
1.0
|
CD2
|
B:PHE194
|
3.7
|
27.6
|
1.0
|
C2
|
B:C8I503
|
3.7
|
40.1
|
0.1
|
C6
|
B:C8I503
|
3.7
|
42.2
|
0.1
|
CE2
|
B:PHE369
|
3.8
|
56.8
|
1.0
|
HD2
|
B:PHE194
|
3.8
|
33.1
|
1.0
|
HD2
|
B:PHE369
|
3.8
|
69.3
|
1.0
|
HD12
|
B:ILE161
|
3.9
|
55.3
|
1.0
|
CD2
|
B:PHE369
|
3.9
|
57.8
|
1.0
|
HG11
|
B:VAL70
|
4.0
|
69.3
|
1.0
|
CD1
|
B:PHE194
|
4.0
|
39.7
|
1.0
|
HG12
|
B:VAL70
|
4.1
|
69.3
|
1.0
|
C6
|
B:C7I502
|
4.1
|
42.0
|
0.9
|
C2
|
B:C7I502
|
4.2
|
40.5
|
0.9
|
C1
|
B:C8I503
|
4.2
|
40.4
|
0.1
|
HD1
|
B:PHE194
|
4.2
|
47.7
|
1.0
|
HB
|
B:ILE161
|
4.3
|
32.3
|
1.0
|
CE2
|
B:PHE194
|
4.3
|
35.8
|
1.0
|
CG1
|
B:VAL70
|
4.5
|
57.8
|
1.0
|
CZ
|
B:PHE369
|
4.5
|
64.0
|
1.0
|
HG22
|
B:VAL373
|
4.5
|
39.2
|
1.0
|
HG13
|
B:ILE161
|
4.5
|
37.8
|
1.0
|
CE1
|
B:PHE194
|
4.6
|
35.8
|
1.0
|
CD1
|
B:ILE161
|
4.7
|
46.1
|
1.0
|
C1
|
B:C7I502
|
4.7
|
40.9
|
0.9
|
CG
|
B:PHE369
|
4.7
|
57.2
|
1.0
|
HD11
|
B:ILE161
|
4.8
|
55.3
|
1.0
|
CZ
|
B:PHE194
|
4.8
|
34.4
|
1.0
|
HZ
|
B:PHE369
|
4.8
|
76.8
|
1.0
|
HE2
|
B:PHE194
|
4.8
|
43.0
|
1.0
|
HG13
|
B:VAL70
|
4.9
|
69.3
|
1.0
|
CG1
|
B:ILE161
|
5.0
|
31.5
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 7n18
Go back to
Chlorine Binding Sites List in 7n18
Chlorine binding site 2 out
of 2 in the Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl503
b:50.3
occ:0.08
|
CL4
|
B:C8I503
|
0.0
|
50.3
|
0.1
|
CL4
|
B:C7I502
|
0.5
|
50.0
|
0.9
|
C4
|
B:C8I503
|
1.8
|
45.6
|
0.1
|
C4
|
B:C7I502
|
2.3
|
45.8
|
0.9
|
C3
|
B:C8I503
|
2.7
|
43.0
|
0.1
|
C5
|
B:C8I503
|
2.9
|
44.3
|
0.1
|
HB3
|
B:PHE194
|
3.1
|
38.6
|
1.0
|
C3
|
B:C7I502
|
3.2
|
42.5
|
0.9
|
HB2
|
B:PHE194
|
3.2
|
38.6
|
1.0
|
C5
|
B:C7I502
|
3.3
|
43.9
|
0.9
|
HE2
|
B:PHE369
|
3.4
|
68.1
|
1.0
|
CB
|
B:PHE194
|
3.5
|
32.2
|
1.0
|
HG11
|
B:VAL70
|
3.6
|
69.3
|
1.0
|
CG
|
B:PHE194
|
3.6
|
30.1
|
1.0
|
HD2
|
B:PHE369
|
3.6
|
69.3
|
1.0
|
CE2
|
B:PHE369
|
3.6
|
56.8
|
1.0
|
HD12
|
B:ILE161
|
3.7
|
55.3
|
1.0
|
CD2
|
B:PHE369
|
3.7
|
57.8
|
1.0
|
HG12
|
B:VAL70
|
3.8
|
69.3
|
1.0
|
CD2
|
B:PHE194
|
3.9
|
27.6
|
1.0
|
HD2
|
B:PHE194
|
4.1
|
33.1
|
1.0
|
CD1
|
B:PHE194
|
4.1
|
39.7
|
1.0
|
CG1
|
B:VAL70
|
4.1
|
57.8
|
1.0
|
C6
|
B:C8I503
|
4.2
|
42.2
|
0.1
|
C2
|
B:C8I503
|
4.2
|
40.1
|
0.1
|
HG22
|
B:VAL373
|
4.2
|
39.2
|
1.0
|
HD1
|
B:PHE194
|
4.3
|
47.7
|
1.0
|
HB
|
B:ILE161
|
4.4
|
32.3
|
1.0
|
CZ
|
B:PHE369
|
4.5
|
64.0
|
1.0
|
CD1
|
B:ILE161
|
4.5
|
46.1
|
1.0
|
HG13
|
B:VAL70
|
4.5
|
69.3
|
1.0
|
HD11
|
B:ILE161
|
4.5
|
55.3
|
1.0
|
HG13
|
B:ILE161
|
4.6
|
37.8
|
1.0
|
C6
|
B:C7I502
|
4.6
|
42.0
|
0.9
|
C2
|
B:C7I502
|
4.7
|
40.5
|
0.9
|
CG
|
B:PHE369
|
4.7
|
57.2
|
1.0
|
CE2
|
B:PHE194
|
4.7
|
35.8
|
1.0
|
C1
|
B:C8I503
|
4.7
|
40.4
|
0.1
|
HZ
|
B:PHE369
|
4.8
|
76.8
|
1.0
|
O
|
B:ASP370
|
4.8
|
56.3
|
1.0
|
CE1
|
B:PHE194
|
4.8
|
35.8
|
1.0
|
CG1
|
B:ILE161
|
4.9
|
31.5
|
1.0
|
CA
|
B:PHE194
|
5.0
|
21.7
|
1.0
|
HB2
|
B:PHE369
|
5.0
|
62.9
|
1.0
|
|
Reference:
L.D.Turner,
A.L.Nielsen,
L.Lin,
A.J.Campedelli,
J.S.Chen,
N.R.Silvaggi,
K.N.Allen,
S.Pellett,
K.D.Janda.
Structure-Based Drug Design of Chiral Inhibitors For the Inhibition of Botulinum Neurotoxin A To Be Published.
Page generated: Tue Jul 30 00:43:01 2024
|