Chlorine in PDB 7n18: Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid

Protein crystallography data

The structure of Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid, PDB code: 7n18 was solved by N.R.Silvaggi, K.N.Allen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.91 / 2.03
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 72.99, 67.292, 97.487, 90, 105.15, 90
R / Rfree (%) 15.8 / 19.6

Other elements in 7n18:

The structure of Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid (pdb code 7n18). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid, PDB code: 7n18:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7n18

Go back to Chlorine Binding Sites List in 7n18
Chlorine binding site 1 out of 2 in the Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:50.0
occ:0.92
CL4 B:C7I502 0.0 50.0 0.9
CL4 B:C8I503 0.5 50.3 0.1
C4 B:C8I503 1.3 45.6 0.1
C4 B:C7I502 1.8 45.8 0.9
C3 B:C8I503 2.2 43.0 0.1
C5 B:C8I503 2.5 44.3 0.1
C3 B:C7I502 2.7 42.5 0.9
C5 B:C7I502 2.9 43.9 0.9
HB3 B:PHE194 3.2 38.6 1.0
HB2 B:PHE194 3.4 38.6 1.0
CG B:PHE194 3.5 30.1 1.0
CB B:PHE194 3.5 32.2 1.0
HE2 B:PHE369 3.6 68.1 1.0
CD2 B:PHE194 3.7 27.6 1.0
C2 B:C8I503 3.7 40.1 0.1
C6 B:C8I503 3.7 42.2 0.1
CE2 B:PHE369 3.8 56.8 1.0
HD2 B:PHE194 3.8 33.1 1.0
HD2 B:PHE369 3.8 69.3 1.0
HD12 B:ILE161 3.9 55.3 1.0
CD2 B:PHE369 3.9 57.8 1.0
HG11 B:VAL70 4.0 69.3 1.0
CD1 B:PHE194 4.0 39.7 1.0
HG12 B:VAL70 4.1 69.3 1.0
C6 B:C7I502 4.1 42.0 0.9
C2 B:C7I502 4.2 40.5 0.9
C1 B:C8I503 4.2 40.4 0.1
HD1 B:PHE194 4.2 47.7 1.0
HB B:ILE161 4.3 32.3 1.0
CE2 B:PHE194 4.3 35.8 1.0
CG1 B:VAL70 4.5 57.8 1.0
CZ B:PHE369 4.5 64.0 1.0
HG22 B:VAL373 4.5 39.2 1.0
HG13 B:ILE161 4.5 37.8 1.0
CE1 B:PHE194 4.6 35.8 1.0
CD1 B:ILE161 4.7 46.1 1.0
C1 B:C7I502 4.7 40.9 0.9
CG B:PHE369 4.7 57.2 1.0
HD11 B:ILE161 4.8 55.3 1.0
CZ B:PHE194 4.8 34.4 1.0
HZ B:PHE369 4.8 76.8 1.0
HE2 B:PHE194 4.8 43.0 1.0
HG13 B:VAL70 4.9 69.3 1.0
CG1 B:ILE161 5.0 31.5 1.0

Chlorine binding site 2 out of 2 in 7n18

Go back to Chlorine Binding Sites List in 7n18
Chlorine binding site 2 out of 2 in the Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Clostridium Botulinum Neurotoxin Serotype A Light Chain Inhibited By A Chiral Hydroxamic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl503

b:50.3
occ:0.08
CL4 B:C8I503 0.0 50.3 0.1
CL4 B:C7I502 0.5 50.0 0.9
C4 B:C8I503 1.8 45.6 0.1
C4 B:C7I502 2.3 45.8 0.9
C3 B:C8I503 2.7 43.0 0.1
C5 B:C8I503 2.9 44.3 0.1
HB3 B:PHE194 3.1 38.6 1.0
C3 B:C7I502 3.2 42.5 0.9
HB2 B:PHE194 3.2 38.6 1.0
C5 B:C7I502 3.3 43.9 0.9
HE2 B:PHE369 3.4 68.1 1.0
CB B:PHE194 3.5 32.2 1.0
HG11 B:VAL70 3.6 69.3 1.0
CG B:PHE194 3.6 30.1 1.0
HD2 B:PHE369 3.6 69.3 1.0
CE2 B:PHE369 3.6 56.8 1.0
HD12 B:ILE161 3.7 55.3 1.0
CD2 B:PHE369 3.7 57.8 1.0
HG12 B:VAL70 3.8 69.3 1.0
CD2 B:PHE194 3.9 27.6 1.0
HD2 B:PHE194 4.1 33.1 1.0
CD1 B:PHE194 4.1 39.7 1.0
CG1 B:VAL70 4.1 57.8 1.0
C6 B:C8I503 4.2 42.2 0.1
C2 B:C8I503 4.2 40.1 0.1
HG22 B:VAL373 4.2 39.2 1.0
HD1 B:PHE194 4.3 47.7 1.0
HB B:ILE161 4.4 32.3 1.0
CZ B:PHE369 4.5 64.0 1.0
CD1 B:ILE161 4.5 46.1 1.0
HG13 B:VAL70 4.5 69.3 1.0
HD11 B:ILE161 4.5 55.3 1.0
HG13 B:ILE161 4.6 37.8 1.0
C6 B:C7I502 4.6 42.0 0.9
C2 B:C7I502 4.7 40.5 0.9
CG B:PHE369 4.7 57.2 1.0
CE2 B:PHE194 4.7 35.8 1.0
C1 B:C8I503 4.7 40.4 0.1
HZ B:PHE369 4.8 76.8 1.0
O B:ASP370 4.8 56.3 1.0
CE1 B:PHE194 4.8 35.8 1.0
CG1 B:ILE161 4.9 31.5 1.0
CA B:PHE194 5.0 21.7 1.0
HB2 B:PHE369 5.0 62.9 1.0

Reference:

L.D.Turner, A.L.Nielsen, L.Lin, A.J.Campedelli, J.S.Chen, N.R.Silvaggi, K.N.Allen, S.Pellett, K.D.Janda. Structure-Based Drug Design of Chiral Inhibitors For the Inhibition of Botulinum Neurotoxin A To Be Published.
Page generated: Tue Jul 30 00:43:01 2024

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