Atomistry » Chlorine » PDB 7nk3-7nqz » 7nq6
Atomistry »
  Chlorine »
    PDB 7nk3-7nqz »
      7nq6 »

Chlorine in PDB 7nq6: High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98

Protein crystallography data

The structure of High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98, PDB code: 7nq6 was solved by S.Trakhanov, D.Goerlich, T.Huyton, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.56 / 1.50
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 72.07, 72.07, 91.82, 90, 90, 90
R / Rfree (%) 17.1 / 19.2

Other elements in 7nq6:

The structure of High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98 also contains other interesting chemical elements:

Sodium (Na) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98 (pdb code 7nq6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98, PDB code: 7nq6:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 7nq6

Go back to Chlorine Binding Sites List in 7nq6
Chlorine binding site 1 out of 3 in the High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl905

b:40.0
occ:0.90
H A:MET822 2.2 33.4 1.0
HA A:CYS821 3.0 32.1 1.0
N A:MET822 3.0 27.8 1.0
HB3 A:CYS821 3.1 37.5 1.0
HG3 A:MET822 3.2 35.9 1.0
HB2 A:MET822 3.2 33.0 1.0
HE1 A:MET822 3.3 35.6 1.0
O A:HOH1024 3.4 51.9 1.0
CA A:CYS821 3.6 26.8 1.0
CB A:CYS821 3.7 31.2 1.0
C A:CYS821 3.8 28.4 1.0
CB A:MET822 3.8 27.5 1.0
CG A:MET822 3.9 29.9 1.0
CA A:MET822 4.0 25.5 1.0
CE A:MET822 4.1 29.6 1.0
HE2 A:MET822 4.3 35.6 1.0
SG A:CYS821 4.4 36.3 1.0
HB2 A:CYS821 4.6 37.5 1.0
HG2 A:MET822 4.7 35.9 1.0
HG A:CYS821 4.7 43.6 1.0
O A:MET822 4.7 28.6 1.0
HA A:MET822 4.7 30.6 1.0
HB3 A:MET822 4.7 33.0 1.0
HE3 A:MET822 4.8 35.6 1.0
O A:ARG820 4.9 30.1 1.0
C A:MET822 4.9 25.6 1.0
SD A:MET822 4.9 30.9 1.0
N A:CYS821 4.9 28.0 1.0

Chlorine binding site 2 out of 3 in 7nq6

Go back to Chlorine Binding Sites List in 7nq6
Chlorine binding site 2 out of 3 in the High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl906

b:28.0
occ:0.54
O A:HOH1066 2.8 20.2 1.0
O A:HOH1078 2.9 17.7 1.0
O A:HOH1165 2.9 38.9 1.0
HG1 A:THR808 3.3 20.5 1.0
HG A:SER760 3.9 24.0 1.0
O A:HOH1208 3.9 36.2 1.0
HH22 A:ARG853 4.0 24.2 1.0
OG A:SER760 4.0 20.0 1.0
OG1 A:THR808 4.2 17.0 1.0
O A:HOH1075 4.2 23.8 1.0
HG21 A:THR808 4.2 22.9 1.0
O A:HOH1187 4.4 52.3 1.0
NA A:NA903 4.4 23.6 1.0
HB A:THR808 4.5 20.5 1.0
O A:HOH1074 4.6 48.6 1.0
HE21 A:GLN806 4.6 22.2 1.0
HH12 A:ARG853 4.6 21.4 1.0
HE22 A:GLN806 4.7 22.2 1.0
NH2 A:ARG853 4.7 20.2 1.0
CB A:THR808 4.8 17.1 1.0
O A:HOH1117 4.8 32.5 1.0
CG2 A:THR808 5.0 19.1 1.0

Chlorine binding site 3 out of 3 in 7nq6

Go back to Chlorine Binding Sites List in 7nq6
Chlorine binding site 3 out of 3 in the High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl907

b:41.4
occ:0.66
H A:ASN771 2.1 32.1 1.0
O A:HOH1069 2.8 40.0 1.0
HA A:THR770 2.8 27.1 1.0
O A:HOH1148 2.8 37.5 1.0
N A:ASN771 3.0 26.7 1.0
HG13 A:ILE720 3.0 34.3 1.0
OD1 A:ASN771 3.4 35.0 1.0
HA2 A:GLY719 3.4 68.3 1.0
HB2 A:CYS746 3.4 28.4 1.0
HA A:ASN771 3.5 32.5 1.0
HB3 A:CYS746 3.5 28.4 1.0
HG22 A:THR770 3.6 29.3 1.0
CA A:THR770 3.6 22.6 1.0
H A:ILE720 3.7 36.8 1.0
H A:GLY719 3.7 92.1 1.0
C A:THR770 3.8 24.5 1.0
CA A:ASN771 3.8 27.1 1.0
CG1 A:ILE720 3.9 28.6 1.0
CB A:CYS746 3.9 23.7 1.0
HG22 A:VAL740 4.0 46.8 1.0
N A:ILE720 4.0 30.7 1.0
HD13 A:ILE720 4.0 36.4 1.0
CA A:GLY719 4.0 56.9 1.0
HG12 A:ILE720 4.1 34.3 1.0
C A:GLY719 4.1 40.6 1.0
CG A:ASN771 4.2 41.2 1.0
N A:GLY719 4.2 76.7 1.0
CG2 A:THR770 4.2 24.4 1.0
HG21 A:THR770 4.3 29.3 1.0
O A:LEU769 4.3 21.3 1.0
HG21 A:VAL740 4.4 46.8 1.0
CD1 A:ILE720 4.4 30.3 1.0
CB A:THR770 4.5 24.1 1.0
H A:CYS746 4.5 28.8 1.0
HG A:CYS746 4.6 32.2 1.0
CB A:ASN771 4.6 29.7 1.0
CG2 A:VAL740 4.6 39.0 1.0
N A:THR770 4.6 22.4 1.0
HD11 A:ILE720 4.7 36.4 1.0
H A:LEU772 4.8 27.2 1.0
C A:LEU769 4.8 22.6 1.0
CA A:ILE720 4.9 27.1 1.0
HA A:ILE720 4.9 32.5 1.0
O A:GLY719 4.9 33.5 1.0
N A:CYS746 4.9 24.0 1.0
HA3 A:GLY719 4.9 68.3 1.0
CB A:ILE720 5.0 25.7 1.0
O A:HOH1017 5.0 38.1 1.0
SG A:CYS746 5.0 26.9 1.0

Reference:

S.Trakhanov, T.Huyton, D.Goerlich. High Resolution Crystal Structure of C-Terminal Domain (Residues 715-866) of Nucleoporin-98 To Be Published.
Page generated: Tue Jul 30 01:04:46 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy