Chlorine in PDB 7oyl: Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate

Enzymatic activity of Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate

All present enzymatic activity of Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate:
5.3.1.9;

Protein crystallography data

The structure of Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate, PDB code: 7oyl was solved by O.G.Raimi, K.Yan, W.Fang, D.M.F.Van Aalten, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.66 / 1.78
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 85.251, 85.251, 232.503, 90, 90, 90
R / Rfree (%) 15.4 / 18

Other elements in 7oyl:

The structure of Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate (pdb code 7oyl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate, PDB code: 7oyl:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7oyl

Go back to Chlorine Binding Sites List in 7oyl
Chlorine binding site 1 out of 2 in the Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:49.7
occ:1.00
O A:HOH858 3.1 33.1 1.0
N A:GLU67 3.4 26.9 1.0
CA A:THR66 3.6 29.6 1.0
CB A:THR66 3.8 30.2 1.0
C A:THR66 4.0 28.8 1.0
CG A:GLU67 4.0 42.7 1.0
O A:HOH1051 4.2 38.8 1.0
CZ A:PHE43 4.4 29.9 1.0
NH1 A:ARG39 4.4 24.3 1.0
CE2 A:PHE43 4.4 28.3 1.0
CG2 A:THR66 4.4 32.4 1.0
OD2 A:ASP36 4.4 35.8 1.0
CB A:GLU67 4.4 33.7 1.0
CA A:GLU67 4.5 29.8 1.0
CE A:LYS42 4.6 50.5 1.0
CD2 A:TYR32 4.6 36.1 1.0
CD A:LYS42 4.6 43.4 1.0
CE2 A:TYR32 4.7 35.4 1.0
CD A:GLU67 4.7 52.2 1.0
OE2 A:GLU67 4.7 57.2 1.0
OG1 A:THR66 4.9 28.8 1.0
O A:LEU65 5.0 25.8 1.0
N A:THR66 5.0 30.3 1.0

Chlorine binding site 2 out of 2 in 7oyl

Go back to Chlorine Binding Sites List in 7oyl
Chlorine binding site 2 out of 2 in the Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Phosphoglucose Isomerase of Aspergillus Fumigatus in Complexed with Glucose-6-Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl602

b:77.3
occ:1.00
O A:HOH1025 3.1 42.9 1.0
O A:HOH1131 3.1 27.4 1.0
OE1 A:GLU387 3.4 25.2 1.0
ND2 A:ASN391 3.4 23.8 0.5
CB A:ASN391 3.7 24.4 0.5
CB A:ASN391 3.8 24.6 0.5
CD A:GLU387 3.9 26.8 1.0
CG A:ASN391 4.0 24.6 0.5
CG A:ASN391 4.3 24.0 0.5
CG A:GLU387 4.3 22.9 1.0
ND2 A:ASN391 4.4 22.8 0.5
CB A:GLU387 4.4 20.7 1.0
CG A:PRO388 4.4 22.8 1.0
CD A:PRO388 4.5 22.9 1.0
O A:HOH933 4.5 27.6 1.0
OE2 A:GLU387 4.7 26.7 1.0

Reference:

Y.Zhou, K.Yan, O.G.Raimi, Q.Qin, B.Wang, C.S.Ahamefule, C.Jin, D.M.F.Van Aalten, W.Fang. Pleiotropic Function and Antifungal Target Potential of Phosphoglucose Isomerase in Aspergillus Fumigatus To Be Published.
Page generated: Tue Apr 4 21:06:02 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy