Chlorine in PDB 7p4v: GLNK1 From Methanothermococcus Thermolithotrophicus with Dadp at A Resolution of 1.94 A

Protein crystallography data

The structure of GLNK1 From Methanothermococcus Thermolithotrophicus with Dadp at A Resolution of 1.94 A, PDB code: 7p4v was solved by M.-C.Mueller, T.Wagner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.30 / 1.94
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 87.296, 87.296, 46.01, 90, 90, 120
R / Rfree (%) 19.7 / 22.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the GLNK1 From Methanothermococcus Thermolithotrophicus with Dadp at A Resolution of 1.94 A (pdb code 7p4v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the GLNK1 From Methanothermococcus Thermolithotrophicus with Dadp at A Resolution of 1.94 A, PDB code: 7p4v:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7p4v

Go back to Chlorine Binding Sites List in 7p4v
Chlorine binding site 1 out of 2 in the GLNK1 From Methanothermococcus Thermolithotrophicus with Dadp at A Resolution of 1.94 A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of GLNK1 From Methanothermococcus Thermolithotrophicus with Dadp at A Resolution of 1.94 A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:61.6
occ:0.26
O A:GLU32 3.7 45.9 1.0
O A:HOH310 3.7 47.5 1.0
CB A:SER31 4.0 53.3 1.0
OG A:SER31 4.5 52.4 1.0
N A:GLU32 4.8 39.6 1.0
C A:GLU32 4.8 42.7 1.0
CG1 A:VAL33 5.0 43.7 1.0

Chlorine binding site 2 out of 2 in 7p4v

Go back to Chlorine Binding Sites List in 7p4v
Chlorine binding site 2 out of 2 in the GLNK1 From Methanothermococcus Thermolithotrophicus with Dadp at A Resolution of 1.94 A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of GLNK1 From Methanothermococcus Thermolithotrophicus with Dadp at A Resolution of 1.94 A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:41.8
occ:0.28
NZ A:LYS3 3.2 53.1 1.0
CE A:LYS3 3.5 52.5 1.0
CD1 A:ILE94 4.0 46.5 1.0
CG2 A:ILE94 4.2 44.8 1.0
OE1 A:GLU5 4.6 58.1 1.0
CD A:LYS3 4.6 47.8 1.0
CG1 A:ILE94 4.9 35.6 1.0
CB A:ILE94 5.0 40.9 1.0

Reference:

M.C.Muller, T.Wagner. The Oxoglutarate Binding Site and Regulatory Mechanism Are Conserved in Ammonium Transporter Inhibitors Glnks From Methanococcales . Int J Mol Sci V. 22 2021.
ISSN: ESSN 1422-0067
PubMed: 34445335
DOI: 10.3390/IJMS22168631
Page generated: Tue Jul 30 02:19:16 2024

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